FastQCFastQC Report
Thu 6 Dec 2018
HG3LMAFXY_n01_c24dna_daplib_dapv1-2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHG3LMAFXY_n01_c24dna_daplib_dapv1-2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGATTAAGTGGAACGGAATTGACTGGGTGGTAGAGTTGTATAAACACC18.333333333333332No Hit
CAAGGTACAAGATGAGGGGTTACCCCAGCGCGCCGTCGGCCAGTCAAACC18.333333333333332No Hit
GCGATATGAGTCTTTGGCTTTGTGTCTTCTAAAAAGGAAACACTACTTAG18.333333333333332No Hit
AATCTGAAATTGTTCTCTTTAGATTCCTTACATCATTCTGATGTATTCTC18.333333333333332No Hit
GCAGCAAGAATAAGGTTGGTTATTGTGTTGGAGTCGACTATGGCTTGATC18.333333333333332No Hit
TCATGTGTATGATTGAGTATAAGAACTTAAACCGCAACCGGATCTTAAAG18.333333333333332No Hit
AGTGTTTTGGAGTCGAATATGACTTGATGTCATGTGGATGATAGATCGGA18.333333333333332No Hit
ACTCACTTGAGTGATAAGGATCTTTGCCAGTGCGGCGGTTGGGTTTGACT18.333333333333332No Hit
GCGACGCAAGCAGAATGTTGGTTAGTGTTTTGGAGTGAAATATGACTTGA18.333333333333332No Hit
CAATCATACAAATGAGCTCAAGTCATATTCGACTCCAAAACACCAACCAA18.333333333333332No Hit
CGGGGGGAGTATGGTCGCAGGGATGAAACTTAACGGAATTGACGGAAGGG18.333333333333332No Hit
GACACAACCACCAGTCATATATTCACAGCAATGATCTCCAGTGCCTTCAA18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)