HG22CBGX9_n01_MT_8721.TR2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HG22CBGX9_n01_MT_8721.TR2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20922057
Sequences flagged as poor quality	0
Sequence length	151
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGAACGCCGGGTTAAGGCGCCCGATGCCGACGCTCATCAGACCCCAGAAA	38430	0.18368174792755798	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	29003	0.1386240368239127	No Hit
CTCCCGTCCACTCTCGACTGCCGGCGACGGCCGGGTATGGGCCCGACGCT	25304	0.1209441308758503	No Hit
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	23350	0.11160470502494091	No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT	23141	0.11060575927118448	No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGC	22437	0.1072408893637944	No Hit
CCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTC	21054	0.10063064066788462	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCCTG	6500	43.057926	5
AGTCTAA	10355	42.923157	3
TCCTGGC	6895	40.06075	7
CCTGGCT	7670	35.445755	8
GAGTCTA	12670	35.252132	2
TTACTTC	10075	33.392746	4
ACTTCCT	10375	32.5671	6
TCTAACA	14060	32.38572	5
GTAGCAT	5430	30.174282	8
TGCCAGT	5200	29.700073	3
GCTCAGA	6705	29.305536	5
CTTGTTA	5075	29.010376	1
GTCTAAC	15665	28.836119	4
TAGCATA	5760	28.697277	9
GCCAGTA	5510	28.68693	4
GTGTCGA	4020	28.678091	4
CCTGCCA	5310	28.409409	1
TGTCGAG	4195	28.345955	5
GTTACGA	5415	27.98511	4
TACTTCC	12285	27.975792	5