Basic Statistics
Measure | Value |
---|---|
Filename | HFYKYAFXY_n01_CAS13D.3.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19130896 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC | 4198544 | 21.946405437570725 | No Hit |
GATAGGTCGCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG | 4171590 | 21.8055129252702 | No Hit |
ATACTGTATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG | 3829212 | 20.015852890528492 | No Hit |
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT | 3100846 | 16.208576953217456 | No Hit |
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC | 2145451 | 11.21458712649946 | No Hit |
ATACTGTATCTCTTGTGGAAAGGACGAAACACCGAACCCTACCAACTGGT | 46433 | 0.24271210297729914 | No Hit |
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCTTACC | 27125 | 0.14178635438716514 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAACAAT | 334710 | 0.0 | 145.01408 | 1 |
ATACTGT | 416370 | 0.0 | 144.92923 | 1 |
TACTGTA | 416955 | 0.0 | 144.79063 | 2 |
ACTGTAT | 417330 | 0.0 | 144.68651 | 3 |
CTGTATC | 417940 | 0.0 | 144.5239 | 4 |
TCGATAC | 458375 | 0.0 | 144.48926 | 4 |
ACGATCG | 232595 | 0.0 | 144.4827 | 1 |
TGTATCT | 418195 | 0.0 | 144.46872 | 5 |
GATACAG | 458445 | 0.0 | 144.45612 | 6 |
GTATCTC | 417995 | 0.0 | 144.39908 | 6 |
ATACAGG | 459025 | 0.0 | 144.38983 | 7 |
CGATAGG | 232770 | 0.0 | 144.31816 | 6 |
CAATGGT | 335830 | 0.0 | 144.31015 | 4 |
ACAATGG | 335845 | 0.0 | 144.30801 | 3 |
TACAGGT | 459565 | 0.0 | 144.20914 | 8 |
TATCTCT | 418475 | 0.0 | 144.12302 | 7 |
GGTCGCA | 444525 | 0.0 | 144.1142 | 5 |
CGATACA | 459180 | 0.0 | 144.097 | 5 |
TCTCTTG | 418005 | 0.0 | 144.02664 | 9 |
ATGGTCT | 336640 | 0.0 | 143.894 | 6 |