Basic Statistics
Measure | Value |
---|---|
Filename | HFYKYAFXY_n01_CAS13D.1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19296176 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATACTGTATCTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGG | 4638467 | 24.038270587913377 | No Hit |
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT | 3918504 | 20.30715308566837 | No Hit |
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGAACCCCTAC | 3486451 | 18.068092869799695 | No Hit |
GATAGGTCGCATCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTG | 3385055 | 17.542620879909055 | No Hit |
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGAACCCCTACC | 2185021 | 11.32359592905869 | No Hit |
ATACTGTATCTCTTGTGGAAAGGACGAAACACCAAACCCCTACCAACTGG | 22874 | 0.11854162192550483 | No Hit |
TAACAATGGTCTTGTGGAAAGGACGAAACACCGAACCCCTATCAACTGGT | 21384 | 0.11081988472741956 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAACAAT | 422755 | 0.0 | 145.04375 | 1 |
ATACTGT | 498280 | 0.0 | 144.89618 | 1 |
TACTGTA | 498920 | 0.0 | 144.73419 | 2 |
ACTGTAT | 499185 | 0.0 | 144.63834 | 3 |
ACGATCG | 377910 | 0.0 | 144.524 | 1 |
CTGTATC | 499775 | 0.0 | 144.48209 | 4 |
CGATAGG | 378200 | 0.0 | 144.45802 | 6 |
TGTATCT | 499995 | 0.0 | 144.45766 | 5 |
GTATCTC | 499890 | 0.0 | 144.40388 | 6 |
ACAATGG | 424680 | 0.0 | 144.31529 | 3 |
CAATGGT | 424685 | 0.0 | 144.29482 | 4 |
GATACAG | 236575 | 0.0 | 144.27155 | 6 |
ATACAGG | 236905 | 0.0 | 144.2147 | 7 |
AGGTCGC | 367335 | 0.0 | 144.15353 | 4 |
AACAATG | 425740 | 0.0 | 144.13246 | 2 |
TAGGTCG | 367585 | 0.0 | 144.0772 | 3 |
TCTCTTG | 499860 | 0.0 | 144.05392 | 9 |
GGTCGCA | 367660 | 0.0 | 144.04977 | 5 |
TCGATAC | 237060 | 0.0 | 144.03145 | 4 |
TATCTCT | 501145 | 0.0 | 144.01295 | 7 |