FastQCFastQC Report
Wed 30 Jan 2019
HFY77AFXY_n01_AH7797-3h-chipMyc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFY77AFXY_n01_AH7797-3h-chipMyc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6606236
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACACG10550.027.29778911
CACGTCT12100.023.80096414
ACACGTC12200.023.42145313
GATCGGA12250.022.2369751
GTCACAC13000.021.28784629
CACACGT13550.021.0879512
ACGTCTG13950.020.96713615
CAGTCAC14100.020.26537127
CGTCTGA15050.019.58415216
TCCAGTC15150.019.00935225
AGCACAC15450.018.64023610
GAGCACA16350.018.0270029
AGTCACA15950.017.35059528
TATCTCG16450.017.0967741
CCAGTCA17000.017.07303626
AGAGCAC17050.017.0229688
CACACTG16950.016.7251831
TCGGAAG17850.016.3883133
GAACTCC18150.015.867311521
CTCGTAT17900.014.95766744
Produced by FastQC (version 0.11.5)