HFWYVAFXY_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFWYVAFXY_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14605947
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATAAATCACCGCGTTCTAGCATGGATTCTGACTTAGAGGCGTTCAGC	20150	0.13795750456988512	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	19733	0.13510250311054806	No Hit
CTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTT	18016	0.12334701748541194	No Hit
ATGTCATTTTGCGTGGGGCAAAGAAATCACCGCGTTCTAGCATGGATTCT	15489	0.10604584557235487	No Hit
CTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAAT	14978	0.10254727064256772	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTAGG	1300	43.590473	46
GTGATCG	1215	42.003338	52
TGGGGCA	3145	40.758186	14
TGCGTGG	4780	38.78551	10
GCGTGGG	4425	38.58322	11
GGGCAAA	3320	38.506298	16
GCTAGGT	1480	38.267666	47
CTAGGTG	1430	38.13529	48
CGTGGGG	4515	37.891453	12
CGGTGGA	1590	35.950768	33
GAGAGAG	1690	35.85282	38
GGAGAGA	1720	35.03047	37
GGGGCAA	3655	34.975437	15
GGCAAAG	3850	33.8397	17
TGCCTAG	1390	33.818943	66
GGTGATC	1515	33.69116	51
GCCTAGT	1425	32.746513	67
ATGTCAT	6680	32.230152	1
CTAGTCT	1490	31.080685	69
TAGTCTC	1390	30.538527	70