HFWWMBGXY_n02_grads_set02_rna_digest_nextseq.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFWWMBGXY_n02_grads_set02_rna_digest_nextseq.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97139224
Sequences flagged as poor quality	0
Sequence length	151
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	287348	0.29581047507647373	No Hit
TTGAGTCCGTTAGAAGATTCTATTCAATTACATTCCATGACGATTCCGTT	121581	0.1251615928082769	No Hit
TTGAGTTCTGGAATTGAATGTAATAGAATGGAGTGGAGTGGACTCGAATA	120111	0.12364830091704253	No Hit
TTGAGTCCATTCCAATTCATTCGATTCCAATACATTGCATAACATTTGAA	115329	0.11872546974433314	No Hit
TTGAGTATGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAAT	103198	0.10623720856571801	No Hit
TTGAGTGGAACGGAATGGACTCGAATGGAGTGGAGTCAAATGGCCTCGAA	100065	0.10301194088188309	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTGAGTA	2276930	139.84143	1
TTGAGTT	2517660	138.07916	1
TTGAGTC	1262800	131.67676	1
TTGAGTG	835835	126.56178	1
TGAGTAT	1303795	113.22773	2
GAGTATC	454905	112.29613	3
TGAGTAC	616580	111.95479	2
TGAGTTC	941560	111.56754	2
GAGTACT	333735	110.57043	3
TGAGTTA	1005515	110.4829	2
ACTAACG	140055	108.30857	7
GAGTTAC	328485	107.3597	3
TGAGTAG	719650	103.99923	2
TGAGTCT	482770	103.71291	2
TGAGTCC	835155	103.358154	2
GTGACCG	63300	102.847725	5
GAGTAGC	286510	102.71706	3
TGAGTTT	748535	101.1859	2
GAGTTCC	225975	101.086815	3
GTTTGCG	107415	100.20208	5