Basic Statistics
Measure | Value |
---|---|
Filename | HFVTVAFX2_n02_vk7-7.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4786468 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 15585 | 0.32560543599163305 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGGGGG | 14805 | 0.0 | 39.27465 | 70 |
CGAGATC | 3810 | 0.0 | 34.80911 | 5 |
AAGATCG | 17700 | 0.0 | 34.1808 | 6 |
AAAGGGG | 28120 | 0.0 | 33.338524 | 70 |
CGCCGTA | 37330 | 0.0 | 33.240227 | 53 |
CCGTATC | 36795 | 0.0 | 33.209145 | 55 |
CGTATCA | 36810 | 0.0 | 33.099827 | 56 |
TCGCCGT | 39875 | 0.0 | 32.918217 | 52 |
GTCGCCG | 43565 | 0.0 | 32.861797 | 51 |
GCCGTAT | 37815 | 0.0 | 32.776875 | 54 |
GGTCGCC | 44050 | 0.0 | 32.697952 | 50 |
CGTGTCA | 2930 | 0.0 | 32.373466 | 56 |
TGGTCGC | 42445 | 0.0 | 32.301575 | 49 |
GATCTCG | 39905 | 0.0 | 32.190758 | 41 |
ATCTCGG | 40265 | 0.0 | 32.093803 | 42 |
CCGTGTC | 3190 | 0.0 | 32.039726 | 55 |
CTCGGTG | 40335 | 0.0 | 31.943344 | 44 |
GTATCAT | 36840 | 0.0 | 31.885254 | 57 |
AGATCTC | 40305 | 0.0 | 31.862602 | 40 |
TCTCGGT | 40175 | 0.0 | 31.791174 | 43 |