HFVL2BGX9_n01_T1aD14.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFVL2BGX9_n01_T1aD14.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35014434
Sequences flagged as poor quality	0
Sequence length	151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG	68783	0.19644184452617452	No Hit
ATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGG	68484	0.19558791097408573	No Hit
GCCAGGTTCCACACGAACGTGCGTTGACGTGACGGGCGAGAGGGCGGCCC	62137	0.17746110075633378	No Hit
CAAACGTTGAGTTAAAGTGCCAAACTTTCCGCTCATGAGACCCCATGAAA	60946	0.17405964637326424	No Hit
CTCACCTGGCCCGGACACCGTGAGGATTGACAGATTGAGAGCTCTTTCAT	59993	0.17133791167379717	No Hit
CTAACGCGTGCGCGAGTCAGGGGCTCGTCCGAAAGCCGCCGTGGCGCAAT	58181	0.1661629029902354	No Hit
GTCCGTCCCCGCCGGCGGCCCGTCGCGCCCTCCCGTGGCGGCGCGGCGGC	54412	0.15539877068982466	No Hit
CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCGCGCGGCGC	51577	0.1473021097527951	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCGTGCGCTCGTGCTC	50231	0.14345798078586677	No Hit
GGAATAATGAAATAGGATCTCGGTTCTATTTTGTTGGTTTTCTGATCTGA	48789	0.13933967917345172	No Hit
CTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCAAATGCTTTCG	48561	0.1386885191404208	No Hit
CCAGGTTCCACACGAACGTGCGTTGACGTGACGGGCGAGAGGGCGGCCCC	48200	0.13765751575478843	No Hit
CCCGCTTTGGGCTGCATTCCCAAGCAACCCGACTCCGGGAAGACCCGGGC	47330	0.1351728261550651	No Hit
CCGAAGTTTCCCTCAGGATAGCTGGCGCTCTCGCAGAGACAACGACCCGT	45024	0.12858697073326958	No Hit
CGGGTGGGTAGCCGACATCGCCGCCGACCCCGTGCGCTCGGCTTGCTCGT	41550	0.11866534812471907	No Hit
CTTTCCCGCTCCCCGTTCCTCCCGACCCCTCCACCCGCGCGTCGTTTCCC	40372	0.11530102128739252	No Hit
CGCCAGGTTCCACACGAACGTGCGTTGACGTGACGGGCGAGAGGGCGGCC	39592	0.11307336854281295	No Hit
CCGCTTTGGGCTGCATTCCCAAGCAACCCGACTCCGGGAAGACCCGGGCC	36553	0.10439409073412412	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTACGAC	9830	55.97512	5
GTTACGA	10000	54.951046	4
TACGCAA	5360	44.359375	9
AACGTTG	20435	44.345062	3
ATACGCA	5570	42.817085	8
TGGCCCG	21855	42.090683	7
CAAACGT	21825	42.028587	1
CGTTGAG	21780	41.939133	5
ACGACTT	13350	41.376034	7
AAACGTT	22120	41.295265	2
GTGCGTC	4405	40.811462	9
GAAACTA	30730	39.868595	4
CTTGTTA	13940	39.584976	1
CCAGACG	7080	38.704735	6
GAGTCTA	13715	35.362682	2
TGAGTTA	26390	35.022507	8
TCTAACG	12665	34.91721	2
AGAAACT	36450	33.63225	3
TGCGCGA	25530	33.47645	9
AGTCTAA	12880	33.320824	3