FastQCFastQC Report
Mon 10 Oct 2022
HFTY3DMXY_n02_BCi.QG3088.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFTY3DMXY_n02_BCi.QG3088.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4515071
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCT102360.22670739839971507No Hit
CTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCT62560.1385581754971295No Hit
CCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCC60830.13472656354684123No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)