HFNNLAFXX_n02_wtdb2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFNNLAFXX_n02_wtdb2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32430816
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	820799	2.530923057871871	No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	271514	0.8372098932077441	Illumina Single End PCR Primer 1 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTCGGT	39070	32.725277	37
ATCTCGG	39675	32.289627	36
CTCGGTG	40460	31.617247	38
GATCTCG	41305	30.956768	35
GGTCGCC	42650	30.634003	44
TAGATCT	124460	30.054516	45
GTCGCCG	43465	29.892408	45
AGATCTC	43745	29.284481	34
TCGGTGG	44755	29.205833	39
AGTGTAG	134155	28.532907	41
GTGTAGA	135305	28.238813	42
GAGTGTA	135580	28.235285	40
GTGGTCG	46605	28.069683	42
GGTGGTC	47070	27.782866	41
TGGTCGC	47870	27.407135	43
AGAGTGT	140400	27.328743	39
TGTAGAT	142205	26.959715	43
AAGAGTG	145650	26.426022	38
AAAGAGT	151320	25.479303	37
GGAAAGA	158145	24.46399	35