FastQCFastQC Report
Mon 4 Apr 2022
HFMCGBGXL_n02_dpr582.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFMCGBGXL_n02_dpr582.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCTACACCATGGACCACCCACATCAAGGTCTCCAGGCTGTCTCTTATA13.571428571428571No Hit
GAGCAGCACTTTACTGATCTGCCACGAAGGCCTGCTGGTACAAGAATTGC13.571428571428571No Hit
GCAGGGTGGCGAGCGGCCCCGTCGCGAAGGAACGCTCGAAGTCTTCGTCG13.571428571428571No Hit
ACTCATGAGACAATTTTCAAGATAAAATGAAATAACCGACACACATAAGC13.571428571428571No Hit
ATGTACCAAAAACCTCAAGTCATGAGCAACACAAACCACTACTAAAGAGT13.571428571428571No Hit
GCCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACACC13.571428571428571No Hit
CGCAACTCGTCGGCGCCGTCATCGGCGTCGGACTCACCTTGGCGCTGTTC13.571428571428571No Hit
GGCCAGCACATGGTCATCAGGTTACTGTCTTCAGAATATCTGTCCTGACC13.571428571428571No Hit
CCCTTGAGCCAGGCCTCAGCCTTTTGTTCGCCCAAATGCTCGGTGACTGC13.571428571428571No Hit
GCGATGCCCTGGGCGAGCCGCTTCGGGTTGGTGCCGAACAGGTCGTCGCC13.571428571428571No Hit
CATAAAAACAATACTAAATAGCAGCAGCTTAGACAGCCCATACAATATAC13.571428571428571No Hit
TGTCATGGCAGAAGAATGACGGACAGACGAGGGATCACGACCTCGAAGCG13.571428571428571No Hit
CGACATGGCTGATCAACTAACCGAAGTAAACTTCGGCACGTACTACGTTC13.571428571428571No Hit
GCGCCCTCCCACCGGCCCGCGCGCGCCTCCCGCCGCCGCGGGGTAGGCGG13.571428571428571No Hit
GTCCATAAACAGCTCGTCCTTGCCGTTGGAGAGCGCGGGCAGGATGCCGC13.571428571428571No Hit
ATGTAGCCCTAGCTGTCCTGGAATTCACTATGTAGACCAGGCTGGCCTTG13.571428571428571No Hit
CTGGTAGACCGTCGACCACGGGCCGAAGCGCTCCGGCATGTCACGCCAGG13.571428571428571No Hit
CCCTCGTCTCACACAAAATTAATTTAAAAAGAAGAAAGAAAAGGAGTTAG13.571428571428571No Hit
GGTTTATTAACATGAGCCTCAAACCTGGCCCAGGGCTGAGGAAGCAAGCA13.571428571428571No Hit
GTGGTAGGTGTTGAGCTTGGCTTGCTTATCGAGCTAGCTGTGCAATGTTT13.571428571428571No Hit
ATTTAAAACTGGGTGTGGTGATGCATGCCTTCAATCCCAGCACTTGGGAG13.571428571428571No Hit
CCTCGATGGCGCTGACGATGCCGGCGGTCACATCCGGGCTGGTCGAGTTC13.571428571428571No Hit
GATATGAACCAACCACCTATGCCTTATGAGAACAGCGAGCTACCGATCTC13.571428571428571No Hit
CTCCCACTCTCGCGTGAAGCGGATCCGCCGCGGACCCGGGGCCGCGGATC13.571428571428571No Hit
ACAAGAAGCTGAGAAATGAAGAGTTCACTGTTGTGATTATTTAAGTATAA13.571428571428571No Hit
GTCGCCATGTAGCGAGCCGGGTACTCACCGCCGCCGTTCTAGGCGACGGA13.571428571428571No Hit
GTCTCATAGGTGATTTCCAAAACTGAGATTAAATGAGATTATATTAGTAT13.571428571428571No Hit
GACCAGAATGGCTTGTAGGGCAGAAGCCATGTCCAGACATGGCTTCTTAA13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)