FastQCFastQC Report
Mon 4 Apr 2022
HFMCGBGXL_n01_dpr573.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFMCGBGXL_n01_dpr573.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7220550
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATAC260360.36058195012845284No Hit
TCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTC84350.11681935586624287No Hit
GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC78860.10921605694857041No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)