Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
HFLJJAFX3_n01_CHAR29_pH4.5_rep1	HFLJJAFX3_n01_CHAR29_pH4.5_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16296938.0	0.0	149.0	46.0	39.63464283913044	149.0	pass	warn	warn	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n01_CHAR29_pH4.5_rep2	HFLJJAFX3_n01_CHAR29_pH4.5_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16924206.0	0.0	149.0	46.0	39.809224636954546	149.0	pass	warn	warn	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n01_CHAR29_pH4.5_rep3	HFLJJAFX3_n01_CHAR29_pH4.5_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17827599.0	0.0	149.0	45.0	38.10803086357268	149.0	pass	warn	pass	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n01_CHAR29_pH4_rep1	HFLJJAFX3_n01_CHAR29_pH4_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17602060.0	0.0	149.0	45.0	44.354954311457256	149.0	pass	warn	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n01_CHAR29_pH4_rep2	HFLJJAFX3_n01_CHAR29_pH4_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	18972759.0	0.0	149.0	47.0	37.446699299067085	149.0	pass	warn	warn	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n01_CHAR29_pH4_rep3	HFLJJAFX3_n01_CHAR29_pH4_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16282823.0	0.0	149.0	46.0	42.60354759259887	149.0	pass	fail	warn	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n01_CHAR29_pH6.2_rep1	HFLJJAFX3_n01_CHAR29_pH6.2_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17656526.0	0.0	149.0	45.0	37.965395205125155	149.0	pass	warn	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n01_CHAR29_pH6.2_rep2	HFLJJAFX3_n01_CHAR29_pH6.2_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15868122.0	0.0	149.0	45.0	40.54980586865384	149.0	pass	warn	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n01_CHAR29_pH6.2_rep3	HFLJJAFX3_n01_CHAR29_pH6.2_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15599118.0	0.0	149.0	45.0	41.5483455771727	149.0	pass	fail	warn	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n01_undetermined	HFLJJAFX3_n01_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6613485.0	0.0	149.0	45.0	35.922163286374484	149.0	pass	fail	pass	pass	fail	pass	pass	pass	fail	warn	fail
HFLJJAFX3_n02_CHAR29_pH4.5_rep1	HFLJJAFX3_n02_CHAR29_pH4.5_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16296938.0	0.0	149.0	46.0	40.57706923324574	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n02_CHAR29_pH4.5_rep2	HFLJJAFX3_n02_CHAR29_pH4.5_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16924206.0	0.0	149.0	45.0	39.8851367457831	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n02_CHAR29_pH4.5_rep3	HFLJJAFX3_n02_CHAR29_pH4.5_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17827599.0	0.0	149.0	45.0	38.09632604086822	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n02_CHAR29_pH4_rep1	HFLJJAFX3_n02_CHAR29_pH4_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17602060.0	0.0	149.0	44.0	44.233878213290964	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n02_CHAR29_pH4_rep2	HFLJJAFX3_n02_CHAR29_pH4_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	18972759.0	0.0	149.0	46.0	35.9048866586567	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n02_CHAR29_pH4_rep3	HFLJJAFX3_n02_CHAR29_pH4_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16282823.0	0.0	149.0	46.0	40.04265912987472	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HFLJJAFX3_n02_CHAR29_pH6.2_rep1	HFLJJAFX3_n02_CHAR29_pH6.2_rep1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17656526.0	0.0	149.0	45.0	38.74510796628191	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n02_CHAR29_pH6.2_rep2	HFLJJAFX3_n02_CHAR29_pH6.2_rep2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15868122.0	0.0	149.0	45.0	41.899052577578	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n02_CHAR29_pH6.2_rep3	HFLJJAFX3_n02_CHAR29_pH6.2_rep3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15599118.0	0.0	149.0	44.0	38.22501902735983	149.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	pass	fail
HFLJJAFX3_n02_undetermined	HFLJJAFX3_n02_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6613485.0	0.0	149.0	48.0	42.91930780915168	149.0	pass	fail	pass	pass	fail	fail	pass	pass	fail	fail	fail