HFLF5BGX9_n01_DJ22.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFLF5BGX9_n01_DJ22.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3665215
Sequences flagged as poor quality	0
Sequence length	76
%GC	30

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGAGTTTTCAGACCTTTTCTGGAATTTTCTGAGCAAACTTCTAATATTT	1609639	43.91663244857396	No Hit
TTTCTGTTTAGCTCCTCAAGCTTCGGAATTTGTCAGAATTTTCCAGAAAA	838612	22.880294880382188	No Hit
AGAGTTTTCAGACCTTTTCTGGAATTTTCTGAGCAAACTTCTAATATTTC	197171	5.3795207102448295	No Hit
TTCTGTTTAGCTCCTCAAGCTTCGGAATTTGTCAGAATTTTCCAGAAAAC	144893	3.9531923775276487	No Hit
TTTCTGTTTAGCTCCTCAAGCTTTTTCTTCTGCTCCGCCCGTTTTTTCAT	59686	1.6284447160671338	No Hit
TAGAGTTTTCAGCCCTTTTCTGGAATTTTCTGAGCAAACTTCTAATATTT	27280	0.7442946730273667	No Hit
TTTCTGTTTAGCTCCTCAAGCTTCAGAAGGTTTCAAAAAACTTCAGAAGG	12771	0.3484379497519245	No Hit
TCTGTTTAGCTCCTCAAGCTTCGGAATTTGTCAGAATTTTCCAGAAAACT	12339	0.33665146519371986	No Hit
GAGTTTTCAGACCTTTTCTGGAATTTTCTGAGCAAACTTCTAATATTTCA	11416	0.31146876786218547	No Hit
TTCTGTTTAGCTCCTCAAGCTTTTTCTTCTGCTCCGCCCGTTTTTTCATG	9869	0.26926114839102205	No Hit
TAGAGTTTTCAGACCTTTTCTGGTAAGCTTGAGGAGCTAAACAGAAAAGA	7498	0.2045719009662462	No Hit
TTTCTGTTTAGCTCCTCAAGCTTACCAGAAAAGGTCTGAAAACTCTAAGA	6370	0.17379608017537854	No Hit
TTTCTGTTTAGCTCCTCAAGCTTACCAGAAAAGGTCTGAAAACTCTATTT	6021	0.16427412852997708	No Hit
TAGAGTTTTCAGACCTTTTCTGGTAAGCTTGAGGAGCTAAACAGAAATAG	5982	0.16321007089625028	No Hit
AGAGTTTTCAGCCCTTTTCTGGAATTTTCTGAGCAAACTTCTAATATTTC	5467	0.14915905342524244	No Hit
TTTCTGTTTAGCTCCTCAAGCTTGTCTCCAAGCAACATCAACTGTCTCCG	4423	0.12067504907624792	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGGTCG	15	0.0022243585	70.00742	40
GCCAGGG	20	7.928371E-5	70.00456	32
TGCGTCC	15	0.0022253215	69.99978	35
TAGAGTT	174720	0.0	69.29243	1
TTTCTGT	138240	0.0	68.95031	1
AGAGTTT	196440	0.0	61.80139	2
CTGAGCA	191850	0.0	61.735962	30
GAGTGTC	191010	0.0	61.71004	55
AGCAAAC	191880	0.0	61.70652	33
CTAATAT	191980	0.0	61.68953	42
AGTGTCT	191235	0.0	61.688683	56
TCTAATA	192030	0.0	61.688053	41
CATTGAG	191075	0.0	61.687073	51
ACTTCTA	192075	0.0	61.683968	38
GAGCAAA	192065	0.0	61.67975	32
ATTGAGT	191330	0.0	61.67803	52
TGTCTAT	191310	0.0	61.677746	58
TTCTGAG	192060	0.0	61.670277	28
TGAGCAA	192180	0.0	61.66554	31
GCAAACT	192235	0.0	61.665405	34