HFL77BGX9_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFL77BGX9_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18297237
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	137074	0.7491513609404523	No Hit
TGTGAAGTGAGTACGGTTTGATCCATGCAGTGTAACATTAAAATGAAAAC	29747	0.16257645894841938	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA	29633	0.16195341405918282	No Hit
GTTTGATCCATGCAGTGTAACATTAAAATGAAAACATTAAAAAAAAAAAA	24677	0.13486735729553045	No Hit
GGAAGTTGGAAACCGCTAAGGAGTGTGTAACAACTCACCTGCCAAATCAA	22967	0.12552168395698213	No Hit
CAAACGTTGAGTTAAAGTGCCAAACTTTCCGCTCATGAGACCCCATGAAA	20146	0.11010405560140037	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	19978	0.10918588418568334	No Hit
CTCACCTGGCCCGGACACCGTGAGGATTGACAGATTGAGAGCTCTTTCAT	19589	0.10705988013381473	No Hit
GCCAGTTCTAAGTTGACTGTTTAACGCCGGCCGAAATATCAAATAAAACA	19135	0.1045786311889604	No Hit
TAACAACTCACCTGCCAAATCAACTAGCCCTGAAAATGGATGGCGCTTGA	18305	0.10004242717083459	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCCAAT	2595	77.37956	1
CTTGTTA	3770	65.65824	1
CCGGCAT	1380	53.96995	1
TCCAATC	4085	51.55181	2
CACCTGG	6855	47.809246	3
TCAAAGG	5180	47.58377	7
ACCTGGC	6895	46.581387	4
GAGCGCT	4775	46.009785	3
GGCATCG	1340	45.99335	3
GACATCG	13160	43.03047	3
CCTGGCC	8190	39.568207	5
CTAGCAT	6445	37.16053	1
GCCCGGA	8820	36.658108	9
GCTTGTA	6130	35.715454	7
CGCAGGC	6705	35.414974	2
CGGGTCT	915	34.314552	1
TCTGGAG	3515	33.206516	5
GGCTCCA	7610	33.057587	6
CTTGTAA	6760	32.708847	8
AGCGCTT	6695	32.70388	4