HFKVNBGX9_n01_NCR6_022.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFKVNBGX9_n01_NCR6_022.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9029005
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTAATCTCGTAT	85751	0.9497281261888769	TruSeq Adapter, Index 22 (97% over 40bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	19437	0.21527288998067895	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATCACTGGTGGACAGCAAAT	11910	0.13190822244533035	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTACAGCTCGTCCTTCTT	11282	0.12495286025425835	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	11125	59.58483	48
CGTACGT	11185	59.548138	34
CGTATGC	11220	59.423122	46
GTATGCC	11185	59.29649	47
GTACGTA	11310	59.0747	35
CTCGTAT	10900	58.374176	44
CCGTACG	11475	58.105186	33
TACGTAA	11490	57.93634	36
TCGTATG	11410	57.820133	45
ACGTCTG	12525	55.83261	15
GCACACG	12580	55.698875	11
CACACGT	12760	54.830868	12
CACGTCT	12920	54.09797	14
ACCGTAC	12350	54.01706	32
AGCACAC	13005	53.958786	10
GCCGTCT	12230	53.286377	51
CAGTCAC	12745	52.781746	27
AGTCACC	12710	52.76274	28
TCCAGTC	13115	52.22585	25
ACACGTC	13485	51.882973	13