HFKNKBGX9_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFKNKBGX9_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21511112
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	606661	2.8202214743710137	No Hit
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	51153	0.23779802736371788	No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	45183	0.21004492933698637	No Hit
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	25326	0.11773449926716945	No Hit
GCCAGTTCTAAGTTGACTGTTTAACGCCGGCCGAAATATCAAATAAAACA	23940	0.1112913177152348	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA	22374	0.10401135933837359	No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	21905	0.101831090833426	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCCAAT	4070	56.24344	1
CTTGTTA	5210	50.4355	1
CACCTGG	8615	45.03953	3
ACCTGGC	9395	41.066635	4
TCCAATC	6685	38.876312	2
CCTGGCC	11140	35.635365	5
TCAAAGG	7970	35.491417	7
GACATCG	13340	35.37861	3
GCCCGGA	10790	35.090187	9
CTGGCCC	12055	33.174786	6
CTCCTGG	10200	31.915203	6
TCCACTC	10845	30.820389	2
GCTTGTA	8000	30.478138	7
CTAGCAT	8810	29.993313	1
TGGCCCG	13585	29.552027	7
TCCTGGT	11170	29.082775	7
GAGCGCT	8465	28.354967	3
CCTGGTG	11515	27.954992	8
ACTCCTG	12165	27.486626	5
GGCTCCA	8285	27.468912	6