HFKMCBGX9_4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFKMCBGX9_4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	255127454
Sequences flagged as poor quality	0
Sequence length	50
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13801732	5.409740027429584	No Hit
CTGTCTCTTATACACATCTGAGGCGGAGACGGTGAGGCTATACGCACCTT	954439	0.37410281999678485	No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAA	402733	0.1578556104745983	No Hit
GATATAGGTAGGAGTAGCGTGGTAAGGGCGATGAGTGTGGGGAGGAATGG	340672	0.13353012177199872	No Hit
CCCAAGAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAAC	272175	0.10668197237605012	No Hit
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTAC	271531	0.10642954952233405	No Hit
CCCCATTCCTCCCCACACTCATCGCCCTTACCACGCTACTCCTACCTATA	265732	0.10415656795603032	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTATACG	104425	42.37325	38
TATACGC	104670	42.284245	39
TACGCAC	105230	41.99316	41
ATACGCA	107025	41.332718	40
GCTATAC	110270	40.16601	37
GGCTATA	114620	38.731106	36
ACGCACC	114390	38.56495	42
ACGGTGA	116415	38.22046	29
GACGGTG	121570	38.016838	28
TCGCATA	35455	36.857643	40
CGGAGAC	126955	36.699966	24
CGACGAT	13685	36.599308	38
ATCGCAT	36380	35.939114	39
TAGCGTG	46355	35.795162	15
CGGTGAG	125250	35.562943	30
CGGTAAT	37740	35.16639	34
CGTGGTA	47815	34.65188	18
CACGCTA	40075	34.374706	32
GGAGACG	136570	34.138844	25
CCGGTAA	38805	34.12216	33