FastQCFastQC Report
Fri 19 Aug 2022
HFKLKDMXY_n01_CA1100L17.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFKLKDMXY_n01_CA1100L17.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84621337
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTCCAGGTATCTCGTAT1390690.1643427118151064TruSeq Adapter, Index 18 (97% over 37bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)