HFJWNBGXC_n01_0813-7R-ABF3-Rest.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJWNBGXC_n01_0813-7R-ABF3-Rest.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20413379
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	58058	0.28441151266529663	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	32067	0.1570881528236947	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	31332	0.1534875730274738	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTG	28191	0.13810060549015427	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	28179	0.13804182051388944	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGA	27350	0.13398075840359405	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTC	25121	0.12306144906240168	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGA	23298	0.11413103141816944	No Hit
CGGGGATGTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACTGGAAC	20519	0.10051741066483898	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTCTAG	20105	37.03151	5
GCTGACT	12660	35.25033	1
GACTCTA	14400	31.283594	4
CTAGCAG	14390	31.1343	8
TACTCTA	10380	29.67467	4
CTGACTC	15345	29.15117	2
CTAGTTG	10480	28.75622	8
TCTAGTT	11105	28.083221	7
CTCTAGT	11410	27.180813	6
GTACTCT	11300	27.103666	3
CTCTAGC	17165	26.530651	6
TGTACTC	11435	26.507805	2
TTGTACT	11545	26.042698	1
GGACACC	11245	25.398176	29
TGACTCT	18065	25.091707	3
ACACCTA	8750	25.079912	31
ACCTCTA	11805	24.93402	17
GACACCT	11435	24.914892	30
ACCTACT	8930	24.77011	33
CTAATGC	11960	24.611118	21