HFJWNBGXC_n01_0813-1RG-EV-Endo.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJWNBGXC_n01_0813-1RG-EV-Endo.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16869629
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	74379	0.4409047762698279	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	31251	0.1852500727787197	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	26535	0.1572945083735985	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	21947	0.13009770398625836	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	18450	0.10936814318797407	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	17854	0.10583516685518099	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTG	17272	0.10238517989933268	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTC	16990	0.10071353673515879	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTGTACT	17665	43.45336	1
TACTCTA	18475	41.681347	4
TGTACTC	18635	41.417023	2
ACTCTAG	23455	41.174427	5
GTACTCT	19010	40.508068	3
CTCTAGT	19740	39.472363	6
TCTAGTT	20165	38.307556	7
CTAGTTG	21245	35.866035	8
GTTACCT	22825	32.906372	14
TAGTTGT	23535	32.643604	9
ACCTCTA	23165	32.52906	17
GGACACC	22865	32.206482	29
ACCTACT	17725	31.7316	33
CTAATGC	23455	31.634914	21
ACACCTA	17915	31.532196	31
GACACCT	23335	31.527803	30
TACCTCT	24230	31.084839	16
TGTTACC	24520	30.788746	13
TTACCTC	24475	30.759375	15
TGGACAC	24175	30.62071	28