HFJWNBGXC_n01_0813-11RG-EV-Endo.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJWNBGXC_n01_0813-11RG-EV-Endo.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22786981
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	146852	0.644455709161297	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	77177	0.3386890084298574	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	44678	0.1960680969541336	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	40235	0.17657012133375632	No Hit
TTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	29271	0.1284549278379615	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	27665	0.12140704378522105	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCTGTAGGAC	25049	0.10992680425722039	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTGTACT	32430	47.532494	1
TGTACTC	34175	45.218613	2
TACTCTA	34165	45.201508	4
ACTCTAG	39115	44.860065	5
GTACTCT	35370	43.76033	3
CTCTAGT	35435	43.43397	6
TCTAGTT	36850	41.71591	7
CTAGTTG	40205	37.904102	8
TAGTTGT	43410	35.177868	9
GTTACCT	43620	34.49407	14
ACCTCTA	44600	33.681046	17
TGTTACC	45490	33.183876	13
CTAATGC	44930	33.130226	21
TTACCTC	45585	33.106895	15
GGACACC	44155	33.070255	29
TACCTCT	45645	33.00963	16
ACCTACT	34115	32.737534	33
ACACCTA	34260	32.589264	31
GACACCT	45050	32.5531	30
CCTCTAA	46560	32.308304	18