Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HFJM7BGXC_n01_S_1 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 7861728.0 pass fail warn 44.0 20.9351270754 HFJM7BGXC_n01_S_1.fastq.gz pass pass HFJM7BGXC_n01_S_10 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 7162386.0 pass fail warn 43.0 19.5472996235 HFJM7BGXC_n01_S_10.fastq.gz warn pass HFJM7BGXC_n01_S_11 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 11139959.0 pass fail warn 45.0 38.2259767706 HFJM7BGXC_n01_S_11.fastq.gz pass pass HFJM7BGXC_n01_S_12 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10603993.0 pass fail warn 42.0 26.2383178937 HFJM7BGXC_n01_S_12.fastq.gz pass pass HFJM7BGXC_n01_S_13 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10295966.0 pass fail warn 43.0 22.8826725452 HFJM7BGXC_n01_S_13.fastq.gz pass pass HFJM7BGXC_n01_S_14 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10244819.0 pass fail warn 43.0 24.0858240926 HFJM7BGXC_n01_S_14.fastq.gz pass pass HFJM7BGXC_n01_S_15 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10030662.0 pass fail warn 43.0 22.047090907 HFJM7BGXC_n01_S_15.fastq.gz warn pass HFJM7BGXC_n01_S_16 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 9847128.0 pass fail warn 42.0 23.0941367399 HFJM7BGXC_n01_S_16.fastq.gz warn pass HFJM7BGXC_n01_S_17 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 12884149.0 pass fail warn 38.0 25.2607063639 HFJM7BGXC_n01_S_17.fastq.gz pass pass HFJM7BGXC_n01_S_18 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 11834691.0 pass fail warn 43.0 29.5128764783 HFJM7BGXC_n01_S_18.fastq.gz pass pass HFJM7BGXC_n01_S_19 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 8524946.0 pass fail warn 45.0 27.139940842 HFJM7BGXC_n01_S_19.fastq.gz warn pass HFJM7BGXC_n01_S_2 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10278302.0 pass fail warn 44.0 25.27580357 HFJM7BGXC_n01_S_2.fastq.gz pass pass HFJM7BGXC_n01_S_20 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 11276232.0 pass fail warn 44.0 28.7676859335 HFJM7BGXC_n01_S_20.fastq.gz warn pass HFJM7BGXC_n01_S_21 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 8477857.0 pass fail warn 45.0 26.5172387006 HFJM7BGXC_n01_S_21.fastq.gz pass pass HFJM7BGXC_n01_S_22 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 11143121.0 pass fail warn 45.0 29.7143341808 HFJM7BGXC_n01_S_22.fastq.gz warn pass HFJM7BGXC_n01_S_3 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 6271747.0 pass fail warn 44.0 29.7500007668 HFJM7BGXC_n01_S_3.fastq.gz pass pass HFJM7BGXC_n01_S_4 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 10041854.0 pass fail warn 44.0 23.00135501 HFJM7BGXC_n01_S_4.fastq.gz pass pass HFJM7BGXC_n01_S_5 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 11072457.0 pass fail warn 44.0 26.1158575096 HFJM7BGXC_n01_S_5.fastq.gz pass pass HFJM7BGXC_n01_S_6 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 19389122.0 pass fail warn 45.0 26.2064516593 HFJM7BGXC_n01_S_6.fastq.gz pass pass HFJM7BGXC_n01_S_7 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass warn 2576710.0 pass fail warn 44.0 33.7244151525 HFJM7BGXC_n01_S_7.fastq.gz warn pass HFJM7BGXC_n01_S_8 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 11527405.0 pass fail warn 43.0 26.1300521816 HFJM7BGXC_n01_S_8.fastq.gz pass pass HFJM7BGXC_n01_S_9 pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 12293462.0 pass fail warn 43.0 38.6251304532 HFJM7BGXC_n01_S_9.fastq.gz warn pass HFJM7BGXC_n01_undetermined pass 0.0 fail 50.0 Sanger / Illumina 1.9 fail pass pass 50.0 Conventional base calls pass fail 86978032.0 pass fail fail 49.0 23.8797982697 HFJM7BGXC_n01_undetermined.fastq.gz pass pass HFJM7BGXC_n02_S_1 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 7861728.0 pass fail fail 9.0 17.2803904115 HFJM7BGXC_n02_S_1.fastq.gz fail pass HFJM7BGXC_n02_S_10 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 7162386.0 pass fail fail 8.0 17.3951970593 HFJM7BGXC_n02_S_10.fastq.gz fail pass HFJM7BGXC_n02_S_11 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 11139959.0 pass fail fail 7.0 14.4934440709 HFJM7BGXC_n02_S_11.fastq.gz fail pass HFJM7BGXC_n02_S_12 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 10603993.0 pass fail fail 8.0 15.3007395805 HFJM7BGXC_n02_S_12.fastq.gz fail pass HFJM7BGXC_n02_S_13 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 10295966.0 pass fail fail 9.0 16.0286119878 HFJM7BGXC_n02_S_13.fastq.gz fail pass HFJM7BGXC_n02_S_14 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 10244819.0 pass fail fail 8.0 15.7665678283 HFJM7BGXC_n02_S_14.fastq.gz fail pass HFJM7BGXC_n02_S_15 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 10030662.0 pass fail fail 7.0 15.5807277742 HFJM7BGXC_n02_S_15.fastq.gz fail pass HFJM7BGXC_n02_S_16 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 9847128.0 pass fail fail 8.0 16.2043532868 HFJM7BGXC_n02_S_16.fastq.gz fail pass HFJM7BGXC_n02_S_17 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 12884149.0 pass fail fail 10.0 15.9629625856 HFJM7BGXC_n02_S_17.fastq.gz fail pass HFJM7BGXC_n02_S_18 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 11834691.0 pass fail fail 8.0 13.9825513483 HFJM7BGXC_n02_S_18.fastq.gz fail pass HFJM7BGXC_n02_S_19 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 8524946.0 pass fail fail 8.0 17.4356534721 HFJM7BGXC_n02_S_19.fastq.gz fail pass HFJM7BGXC_n02_S_2 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 10278302.0 pass fail fail 8.0 15.6262237549 HFJM7BGXC_n02_S_2.fastq.gz fail pass HFJM7BGXC_n02_S_20 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 11276232.0 pass fail fail 8.0 14.4917919969 HFJM7BGXC_n02_S_20.fastq.gz fail pass HFJM7BGXC_n02_S_21 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 8477857.0 pass fail fail 7.0 17.50102756 HFJM7BGXC_n02_S_21.fastq.gz fail pass HFJM7BGXC_n02_S_22 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 11143121.0 pass fail fail 7.0 14.5104105033 HFJM7BGXC_n02_S_22.fastq.gz fail pass HFJM7BGXC_n02_S_3 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 6271747.0 pass fail fail 7.0 17.0100197204 HFJM7BGXC_n02_S_3.fastq.gz fail pass HFJM7BGXC_n02_S_4 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 10041854.0 pass fail fail 8.0 16.0934309495 HFJM7BGXC_n02_S_4.fastq.gz fail pass HFJM7BGXC_n02_S_5 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 11072457.0 pass fail fail 8.0 14.8668398519 HFJM7BGXC_n02_S_5.fastq.gz fail pass HFJM7BGXC_n02_S_6 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 19389122.0 pass fail fail 8.0 13.6464341209 HFJM7BGXC_n02_S_6.fastq.gz fail pass HFJM7BGXC_n02_S_7 pass 0.0 fail 25.0 Sanger / Illumina 1.9 fail fail pass 25.0 Conventional base calls pass fail 2576710.0 pass fail fail 8.0 18.8007732953 HFJM7BGXC_n02_S_7.fastq.gz fail pass HFJM7BGXC_n02_S_8 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 11527405.0 pass fail fail 9.0 14.6782623886 HFJM7BGXC_n02_S_8.fastq.gz fail pass HFJM7BGXC_n02_S_9 pass 0.0 fail 25.0 Sanger / Illumina 1.9 warn fail pass 25.0 Conventional base calls pass fail 12293462.0 pass fail fail 7.0 15.7639780733 HFJM7BGXC_n02_S_9.fastq.gz fail pass HFJM7BGXC_n02_undetermined pass 0.0 warn 25.0 Sanger / Illumina 1.9 fail pass pass 25.0 Conventional base calls pass fail 86978032.0 pass fail fail 53.0 61.6107569571 HFJM7BGXC_n02_undetermined.fastq.gz warn pass