HFJM7BGXC_n01_S_8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJM7BGXC_n01_S_8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11527405
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACACGTTCGAATCTCGTATGCC	33247	0.2884170374858869	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	30854	0.2676578119706907	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	18899	0.16394843418792	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	18805	0.16313298613174432	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACACGTTCGAATCTCGTATGC	18201	0.15789329862184942	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	16028	0.1390425685572772	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	14489	0.12569177538223042	No Hit
GACAGAAATCAGGTATTGGCAGTTTTTCCATTTTCATTTGTGTGTGAATT	13650	0.11841346773189629	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTACTCG	10815	35.639877	2
TACTCGG	10840	35.47665	3
GCTACTC	22225	35.09174	1
GTATGCC	6830	34.497673	44
GCGTTCT	1540	34.42695	10
TCCGACG	1340	34.313305	41
CTACTTG	12705	33.974487	2
AGGCTGA	48655	33.888184	11
GCGACGT	520	33.844704	13
ATACCGC	865	33.82617	35
GCTACTT	13330	33.78455	1
AGAATCG	9440	33.350754	24
GAATCGC	9050	33.3295	25
AATCGCT	9210	33.108803	26
ACTCGGG	11830	32.786583	4
CTCGGGA	12715	32.65007	5
GCACTTT	15710	32.615482	1
TACTCAG	11735	32.602203	3
TACTTGG	13340	32.34091	3
CGACGGC	1375	32.319878	43