HFJM7BGXC_n01_S_22.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJM7BGXC_n01_S_22.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11143121
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACGAACGGTAATCTCGTATGCC	29400	0.26383990625247633	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	27754	0.2490684611609261	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	21856	0.19613894527394973	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	17462	0.15670654567961703	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACGAACGGTAATCTCGTATGC	17380	0.1559706656689809	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGAACGGTACTCTCGTATGCC	13205	0.11850360415183502	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	13105	0.11760618950471775	No Hit
CCCACTGTGGTGCCTGGTGGAGACCTGGCCAAGGTACAGAGAGCTGTGTG	11935	0.10710643813344574	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	7065	35.09468	44
GCACTTT	27160	34.263702	1
GAATCGC	10080	33.63513	25
AGAATCG	10405	33.599045	24
AGGCTGA	59040	33.57212	11
CTACTTG	14040	33.454643	2
TTGGGAG	47180	33.298958	6
TACTCGG	12635	33.170143	3
AATCGCT	10375	33.16471	26
AGGCCGA	12970	32.9559	11
GCTACTC	26680	32.90937	1
TCCGACG	1025	32.838806	41
CTACTCG	12825	32.81582	2
GCTACTT	14625	32.687943	1
TTTGGGA	33055	32.565945	5
TTGAACC	26675	32.403618	32
GGAGGCT	62630	32.055336	9
GAGAATC	20635	31.98586	23
TACTTGG	15015	31.941753	3
GAGGCCG	13555	31.695896	10