HFJM7BGXC_n01_S_14.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFJM7BGXC_n01_S_14.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10244819
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25666	0.25052663204689124	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	20010	0.19531823841885346	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTCCATCCATCTCGTATGCC	18686	0.18239463283831564	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	18242	0.17806073489438906	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	15428	0.15059319252004355	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	14175	0.13836262016927775	No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	12220	0.11927980377203345	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTTCT	2230	37.98062	10
CGGAGCG	2310	36.85844	6
TCGGAGC	2345	36.307964	5
GAGCGTT	2305	36.076897	8
GACACGT	2535	35.582413	21
CTACTCG	4100	35.469025	2
AGACACG	2615	35.16673	20
TCCGACG	1105	34.84184	41
CGTTCTC	2440	34.711628	11
TACTCGG	4250	34.372475	3
GTCGAAT	1290	33.766163	10
CGGCCTA	2815	33.76071	10
ATGCGCC	2510	33.393806	31
AATCGCT	3365	33.017673	26
ACGTGCC	2755	32.82213	24
TCGCCGA	690	32.522884	6
GCTACTC	9410	32.451572	1
GAATCGC	3360	32.28169	25
CGACGGC	1180	32.068302	43
ATACCGC	1140	32.034657	35