HFHMCBGXG_n02_cDNA4_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFHMCBGXG_n02_cDNA4_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	80593334
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	970708	1.2044519711766732	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	231459	0.2871937274613804	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	136927	0.16989866680537127	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	118451	0.14697369387895032	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	114542	0.14212341680764812	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	86258	0.10702870289495654	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	261005	46.916447	1
AGCAGTG	287495	42.503532	2
CAGTGGT	357175	34.139797	4
ATCAACG	365595	33.34723	11
TGGTATC	366510	33.189793	7
GTATCAA	368690	33.040253	9
AGTGGTA	369615	33.011574	5
TCAACGC	369170	32.996017	12
TATCAAC	370675	32.947838	10
CAACGCA	370575	32.907818	13
AACGCAG	372690	32.766853	14
GCAGTGG	373440	32.7623	3
GGTATCA	372215	32.692364	8
ACGCAGA	373285	32.69158	15
AGAGTAC	374020	32.499413	19
GTGGTAT	378540	32.177307	6
GCAGAGT	379750	32.067314	17
GAGTACT	377345	32.029488	20
CAGAGTA	380815	32.027267	18
GTACTTT	376800	31.940992	22