HFHMCBGXG_n02_cDNA3_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFHMCBGXG_n02_cDNA3_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	133263495
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1535255	1.152044676601045	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	340946	0.2558435076312534	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	217476	0.1631924781801648	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	189531	0.1422227444957826	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	184582	0.13850904930866476	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	137701	0.1033298728957994	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	416160	46.829685	1
AGCAGTG	460880	42.21428	2
CAGTGGT	571985	33.92622	4
ATCAACG	584055	33.25803	11
TGGTATC	586140	33.034325	7
TCAACGC	590130	32.89983	12
GTATCAA	590205	32.87475	9
AGTGGTA	591755	32.834755	5
TATCAAC	592870	32.823112	10
CAACGCA	592165	32.82112	13
AACGCAG	595355	32.667713	14
GGTATCA	595045	32.57945	8
ACGCAGA	596655	32.577156	15
GCAGTGG	600120	32.455013	3
AGAGTAC	597635	32.420418	19
GTGGTAT	605890	32.003605	6
GCAGAGT	606840	31.973572	17
CAGAGTA	608050	31.95851	18
GAGTACT	602910	31.946815	20
CGCAGAG	610225	31.85236	16