HFHMCBGXG_n02_cDNA2_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFHMCBGXG_n02_cDNA2_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	130701004
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1547403	1.183925870990249	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	385165	0.29469169188631483	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	217926	0.16673628612676916	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	186636	0.14279614868145926	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	181555	0.13890864985245255	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	137309	0.10505581120096062	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	413050	46.777763	1
AGCAGTG	456120	42.289658	2
CAGTGGT	565540	34.00781	4
ATCAACG	577645	33.272877	11
TGGTATC	579200	33.108166	7
GTATCAA	582920	32.93465	9
AGTGGTA	585145	32.89847	5
TCAACGC	583920	32.897484	12
CAACGCA	585685	32.833454	13
TATCAAC	585920	32.830265	10
AACGCAG	589540	32.66385	14
GGTATCA	587805	32.634083	8
ACGCAGA	590575	32.59206	15
GCAGTGG	593045	32.5756	3
AGAGTAC	591190	32.449955	19
GTGGTAT	598730	32.093864	6
GAGTACT	596360	31.983452	20
CAGAGTA	601695	31.978432	18
GCAGAGT	601100	31.974237	17
GTACTTT	594145	31.94855	22