HFHMCBGXG_n02_cDNA1_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFHMCBGXG_n02_cDNA1_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	73657944
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	851081	1.155450388351866	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	215309	0.292309272167575	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	122218	0.1659264342214059	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	103317	0.14026592976855287	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	100334	0.13621612897585086	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	78222	0.10619628481620394	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	230615	46.82987	1
AGCAGTG	255360	42.246605	2
CAGTGGT	317710	33.883747	4
ATCAACG	324085	33.208027	11
TGGTATC	324835	33.04906	7
TCAACGC	327155	32.887142	12
GTATCAA	327040	32.877518	9
CAACGCA	328110	32.815052	13
TATCAAC	328530	32.7966	10
AGTGGTA	328800	32.770073	5
AACGCAG	330070	32.658726	14
GGTATCA	329925	32.579113	8
ACGCAGA	330880	32.57032	15
GCAGTGG	333655	32.436733	3
AGAGTAC	331365	32.394688	19
GTGGTAT	336280	31.974726	6
GCAGAGT	337005	31.935755	17
CAGAGTA	337690	31.918676	18
GAGTACT	334450	31.895926	20
CGCAGAG	339275	31.78609	16