HFHGMBGXC_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFHGMBGXC_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22406106
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1644928	7.341427376983756	No Hit
AGATCGGAAGAGCACACGTCTGAACTCCAGTCTACACTCTTTCCCTACAC	47898	0.21377208516285695	Illumina Multiplexing PCR Primer 2.01 (96% over 32bp)
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25866	0.11544174610260258	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAGTCTA	11915	64.52906	28
CCAGTCT	12460	63.109352	27
GATATAG	2870	61.942894	62
CGATATA	3140	61.52121	61
TCTACAC	9265	61.078423	31
TACACTC	8110	59.8579	33
TATTCCG	2070	59.680496	56
CTACACT	9005	58.767056	32
TCCGATA	4560	57.9441	59
ATATAGA	3310	55.40448	63
TTCCCTA	11185	53.632626	41
TAGATAG	3350	53.599617	66
TCCCTAC	9825	53.148792	42
AGATCGG	29835	52.88099	1
CACGCTA	1365	52.81365	51
CGCTATT	2345	52.23248	53
CTAGATA	2040	51.987118	65
CCCTACA	10610	51.95405	43
TTTCCCT	11430	51.655468	40
ATCTAGA	6370	51.535328	63