FastQCFastQC Report
Tue 2 Jul 2024
HFHGFDRX5_n02_YTW272_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n02_YTW272_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAATTAAAATAACTCACGTAAAAAATGAATACATACAAAATAAACAAAA16.25No Hit
AGAAGAACTGCCTAATTTTTACACAGTTGGCATGAACGAATATGTAGCTG16.25No Hit
CAACAAATTACTCAATAAAAACCCAACAAAGAAAATCTTATAAAAATTAA16.25No Hit
TAACACTTATAAAGAATAAGGGACAAATGATTCATCATCACAACCTTCGT16.25No Hit
GAACTGGGTAACACAAACAAAATAGATTTTTAACCTAAAATACAGAAATC16.25No Hit
AAACAACGGGGCGTAACCGGTTACTATGAGGCCACAAATCAACTTGCGCT16.25No Hit
ATGAAAGAATAATCCTGCTAAAGAAGTAGCTGCCAAACGCAGACAATAAG16.25No Hit
ATAAAAAAAAAAATTAAAGAATATAAAAAAAAAAAAAAAACTAAAAAGAA16.25No Hit
ATAAAAACAAGAAAGGTATTCTGAGAAAAATAGACGCTTACAGAATACAA16.25No Hit
TAAGTGACTATTATGTCCAAGGCGTGACCTAGGGCAAGGATACCGAAGTA16.25No Hit
GAAAACAAATAGATAAAAAAATAAATAAACAAATAAAAGTAAACAAACAA16.25No Hit
AGAAACTAGATATAAAATAAAAAAAGATGAGTATGTATAAAATCCGTGAA16.25No Hit
AACATAAGCAATACATCAAAATTAAAACTAAAAAATAAAATAAAAATTAC16.25No Hit
ATTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAA16.25No Hit
GTAAATCCCTTCAGCCTCTTCTTGTTTAAACAACTTTTCACCGCTTCCCT16.25No Hit
ATTAACAAAAGAAATAAATAATTAATAAAAATTACGAAAGAATAATTGAA16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)