FastQCFastQC Report
Tue 2 Jul 2024
HFHGFDRX5_n02_YTW268_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n02_YTW268_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGAGCCGCCTGGAGTAAGTATAGGTGGAGATACTATAGTAGGTCTTTG112.5No Hit
TTTCCGATTGACGCATGCATTCTTGAAATATTGCTTACGACAGATCGGAA112.5No Hit
GGTCATTCGCTTCTGCCGAGTGTCAACAATATAGTTTTCCGTAAAGAGAT112.5No Hit
CAAAACAAAAGGAATAACGAACAAATAAATCCAAAACGATAAACATTTCA112.5No Hit
TTCATCAATCGATAAAAACTGAGTAAACGAATCGCTCTGGGTCACGGGGT112.5No Hit
ATTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAA112.5No Hit
AATAAACCTAGAAAGATAGACTTCTTAAAATTCACGCAAGCATTCTTAAC112.5No Hit
AAGATAGTCTGCGTAAAATTGACGCATGCATTCTTGAAATATTGCTTACG112.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)