FastQCFastQC Report
Tue 9 Jul 2024
HFHGFDRX5_n01_YTW257_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFHGFDRX5_n01_YTW257_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14103524
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATC1090646877.3315094865652No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCAGATCG2765631.9609496179820023No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGATCGGA2690331.9075587066041084No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCACAGAT2464741.7476057756912386No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTAGATCGGAAGAGC1435641.0179299868600218No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACAGAT1425731.010903374220514No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTAGA1254480.8894798207880528No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGATCGGAA1020020.7232376815893673No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGAGATCG815410.5781604654269387No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACAGATCGGAAG671830.47635612205857203No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATAGATCGGAAGAGCAC634410.44982374617861465No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGAGCTGAGTA608400.4313815469098361No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTATA485950.3445592746890777No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCGGACTATC375580.26630223765351124No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGGCTATC314650.2231002691242274No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTACC297670.2110607249649095No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTAGATCGGAAGAG260050.18438654055539594No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGAGATCGGAA257320.1824508541269544No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACCATC235480.1669653626994218No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTGTC226160.1603570852221048No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACGCAGACTAAG221590.15711676032174654No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGAGATCGG214800.15230236074331494No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTACACAGACTATC202000.14322661485172075No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATCGGAAGAGCAAGATC197290.1398870239806732No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCATTTTTACGCAGACTATC155910.11054683921550387No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTTTGCGCAGACTATC150780.10690945043238839No Hit
GTCGTAAGCAATATTTCAAGAATGCATGCGTCAATTAGATCGGAAGAGCA145210.10296008288424936No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)