Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HFGGKBGXG_n01_10X_CD8_v2_1_1_ADT HFGGKBGXG_n01_10X_CD8_v2_1_1_ADT.fastq.gz Conventional base calls Sanger / Illumina 1.9 38132542.0 0.0 26.0 47.0 94.68513987965139 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_1_GEX_1 HFGGKBGXG_n01_10X_CD8_v2_1_1_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 36087922.0 0.0 26.0 49.0 89.01371168668332 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_1_GEX_2 HFGGKBGXG_n01_10X_CD8_v2_1_1_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 49331511.0 0.0 26.0 49.0 86.60895824970268 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_1_HTO HFGGKBGXG_n01_10X_CD8_v2_1_1_HTO.fastq.gz Conventional base calls Sanger / Illumina 1.9 26433796.0 0.0 26.0 47.0 66.39711269965782 26.0 pass pass pass pass warn pass pass pass warn pass pass HFGGKBGXG_n01_10X_CD8_v2_1_1_ORF_1 HFGGKBGXG_n01_10X_CD8_v2_1_1_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 21128312.0 0.0 26.0 49.0 30.354317499767053 26.0 pass pass pass pass warn pass pass pass fail pass pass HFGGKBGXG_n01_10X_CD8_v2_1_1_ORF_2 HFGGKBGXG_n01_10X_CD8_v2_1_1_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19727299.0 0.0 26.0 49.0 30.69785359426423 26.0 pass pass pass pass warn pass pass pass fail pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_ADT HFGGKBGXG_n01_10X_CD8_v2_1_3_ADT.fastq.gz Conventional base calls Sanger / Illumina 1.9 36303195.0 0.0 26.0 47.0 93.99184394145031 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_GEX_1 HFGGKBGXG_n01_10X_CD8_v2_1_3_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 36613549.0 0.0 26.0 49.0 87.65296214072234 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_GEX_2 HFGGKBGXG_n01_10X_CD8_v2_1_3_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 40776869.0 0.0 26.0 49.0 86.84122981890008 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_HTO HFGGKBGXG_n01_10X_CD8_v2_1_3_HTO.fastq.gz Conventional base calls Sanger / Illumina 1.9 24150907.0 0.0 26.0 47.0 71.90937506343359 26.0 pass pass pass pass warn pass pass pass pass pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_ORF_1 HFGGKBGXG_n01_10X_CD8_v2_1_3_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 26283892.0 0.0 26.0 49.0 27.40287852319977 26.0 pass pass pass pass pass pass pass pass fail pass pass HFGGKBGXG_n01_10X_CD8_v2_1_3_ORF_2 HFGGKBGXG_n01_10X_CD8_v2_1_3_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 28834523.0 0.0 26.0 49.0 26.998073260814042 26.0 pass pass pass pass pass pass pass pass fail pass pass HFGGKBGXG_n01_undetermined HFGGKBGXG_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 48767507.0 0.0 26.0 46.0 33.941679898901214 26.0 pass pass pass pass pass pass pass pass fail warn pass HFGGKBGXG_n02_10X_CD8_v2_1_1_ADT HFGGKBGXG_n02_10X_CD8_v2_1_1_ADT.fastq.gz Conventional base calls Sanger / Illumina 1.9 38132542.0 0.0 49.0 46.0 95.19025277531173 49.0 pass pass pass pass fail pass pass pass pass pass pass HFGGKBGXG_n02_10X_CD8_v2_1_1_GEX_1 HFGGKBGXG_n02_10X_CD8_v2_1_1_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 36087922.0 0.0 49.0 50.0 27.948023430771396 49.0 pass pass pass pass warn pass pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_1_GEX_2 HFGGKBGXG_n02_10X_CD8_v2_1_1_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 49331511.0 0.0 49.0 50.0 26.45976111275613 49.0 pass pass pass pass warn pass pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_1_HTO HFGGKBGXG_n02_10X_CD8_v2_1_1_HTO.fastq.gz Conventional base calls Sanger / Illumina 1.9 26433796.0 0.0 49.0 44.0 67.37091131607895 49.0 pass pass pass pass fail fail pass pass warn fail pass HFGGKBGXG_n02_10X_CD8_v2_1_1_ORF_1 HFGGKBGXG_n02_10X_CD8_v2_1_1_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 21128312.0 0.0 49.0 54.0 20.749725169919504 49.0 pass pass pass pass fail warn pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_1_ORF_2 HFGGKBGXG_n02_10X_CD8_v2_1_1_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19727299.0 0.0 49.0 54.0 20.999468040530868 49.0 pass pass pass pass fail warn pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_3_ADT HFGGKBGXG_n02_10X_CD8_v2_1_3_ADT.fastq.gz Conventional base calls Sanger / Illumina 1.9 36303195.0 0.0 49.0 46.0 94.63427195296606 49.0 pass pass pass pass fail pass pass pass pass pass pass HFGGKBGXG_n02_10X_CD8_v2_1_3_GEX_1 HFGGKBGXG_n02_10X_CD8_v2_1_3_GEX_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 36613549.0 0.0 49.0 50.0 27.13095934899788 49.0 pass pass pass pass warn warn pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_3_GEX_2 HFGGKBGXG_n02_10X_CD8_v2_1_3_GEX_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 40776869.0 0.0 49.0 50.0 26.59014775649936 49.0 pass pass pass pass warn warn pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_3_HTO HFGGKBGXG_n02_10X_CD8_v2_1_3_HTO.fastq.gz Conventional base calls Sanger / Illumina 1.9 24150907.0 0.0 49.0 43.0 72.91406781408476 49.0 pass pass pass pass fail fail pass pass pass fail pass HFGGKBGXG_n02_10X_CD8_v2_1_3_ORF_1 HFGGKBGXG_n02_10X_CD8_v2_1_3_ORF_1.fastq.gz Conventional base calls Sanger / Illumina 1.9 26283892.0 0.0 49.0 54.0 20.501271985401605 49.0 pass pass pass pass fail warn pass pass fail fail pass HFGGKBGXG_n02_10X_CD8_v2_1_3_ORF_2 HFGGKBGXG_n02_10X_CD8_v2_1_3_ORF_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 28834523.0 0.0 49.0 54.0 19.961298448174798 49.0 pass pass pass pass fail warn pass pass fail fail pass HFGGKBGXG_n02_undetermined HFGGKBGXG_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 48767507.0 0.0 49.0 49.0 21.626608246417607 49.0 pass pass pass pass warn fail pass pass fail fail pass