[2021-02-13 06:32:27,849] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2021-02-13 06:32:27,849] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2021-02-13 06:32:27,849] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2021-02-13 06:32:27,850] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2021-02-13 06:32:27,850] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}} [2021-02-13 06:32:27,850] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HFGF5BGXH/merged [2021-02-13 06:32:29,391] multiqc [DEBUG ] Latest MultiQC version is v1.9 [2021-02-13 06:32:29,391] multiqc [INFO ] This is MultiQC v1.9 [2021-02-13 06:32:29,391] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HFGF5BGXH/merged [2021-02-13 06:32:29,391] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HFGF5BGXH/merged [2021-02-13 06:32:29,391] multiqc [INFO ] Template : default [2021-02-13 06:32:29,391] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2021-02-13 06:32:29,392] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HFGF5BGXH/merged [2021-02-13 06:32:29,392] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2021-02-13 06:32:29,392] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-2718776/tmpfohryeo5 [2021-02-13 06:32:29,497] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_2_fastqc.html [2021-02-13 06:32:29,499] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_2_fastqc.html [2021-02-13 06:32:29,543] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_4_fastqc.html [2021-02-13 06:32:29,545] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_4_fastqc.html [2021-02-13 06:32:29,599] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_HTO_fastqc.html [2021-02-13 06:32:29,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_HTO_fastqc.html [2021-02-13 06:32:29,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_2_fastqc.html [2021-02-13 06:32:29,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_2_fastqc.html [2021-02-13 06:32:29,685] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_1_fastqc.html [2021-02-13 06:32:29,686] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_1_fastqc.html [2021-02-13 06:32:29,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:29,730] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-02-13 06:32:30,338] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_3_fastqc.html [2021-02-13 06:32:30,340] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_3_fastqc.html [2021-02-13 06:32:30,405] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_4_fastqc.html [2021-02-13 06:32:30,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_4_fastqc.html [2021-02-13 06:32:30,480] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_undetermined_fastqc.html [2021-02-13 06:32:30,482] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_undetermined_fastqc.html [2021-02-13 06:32:30,575] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_3_fastqc.html [2021-02-13 06:32:30,576] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_3_fastqc.html [2021-02-13 06:32:30,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_3_fastqc.html [2021-02-13 06:32:30,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_3_fastqc.html [2021-02-13 06:32:30,692] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_4_fastqc.html [2021-02-13 06:32:30,694] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ORF_4_fastqc.html [2021-02-13 06:32:30,759] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_2_fastqc.html [2021-02-13 06:32:30,761] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_2_fastqc.html [2021-02-13 06:32:30,834] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_1_fastqc.html [2021-02-13 06:32:30,836] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_1_fastqc.html [2021-02-13 06:32:30,885] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_1_fastqc.html [2021-02-13 06:32:30,886] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_1_fastqc.html [2021-02-13 06:32:30,950] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_undetermined_fastqc.html [2021-02-13 06:32:30,952] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_undetermined_fastqc.html [2021-02-13 06:32:31,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_1_fastqc.html [2021-02-13 06:32:31,018] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_1_fastqc.html [2021-02-13 06:32:31,084] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_2_fastqc.html [2021-02-13 06:32:31,085] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_TCR_2_fastqc.html [2021-02-13 06:32:31,126] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ADT_fastqc.html [2021-02-13 06:32:31,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_ADT_fastqc.html [2021-02-13 06:32:31,180] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_1_fastqc.html [2021-02-13 06:32:31,182] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_1_fastqc.html [2021-02-13 06:32:31,237] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_2_fastqc.html [2021-02-13 06:32:31,239] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_2_fastqc.html [2021-02-13 06:32:31,293] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_1_fastqc.html [2021-02-13 06:32:31,295] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_1_fastqc.html [2021-02-13 06:32:31,356] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ADT_fastqc.html [2021-02-13 06:32:31,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ADT_fastqc.html [2021-02-13 06:32:31,414] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_4_fastqc.html [2021-02-13 06:32:31,416] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_4_fastqc.html [2021-02-13 06:32:31,477] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_3_fastqc.html [2021-02-13 06:32:31,479] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_3_fastqc.html [2021-02-13 06:32:31,539] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_4_fastqc.html [2021-02-13 06:32:31,541] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_TCR_4_fastqc.html [2021-02-13 06:32:31,598] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_4_fastqc.html [2021-02-13 06:32:31,599] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_ORF_4_fastqc.html [2021-02-13 06:32:31,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_3_fastqc.html [2021-02-13 06:32:31,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_GEX_3_fastqc.html [2021-02-13 06:32:31,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_2_fastqc.html [2021-02-13 06:32:31,685] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_2_fastqc.html [2021-02-13 06:32:31,725] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_3_fastqc.html [2021-02-13 06:32:31,727] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n01_10X_CD8_GEX_3_fastqc.html [2021-02-13 06:32:31,776] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_HTO_fastqc.html [2021-02-13 06:32:31,778] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFGF5BGXH_n02_10X_CD8_HTO_fastqc.html [2021-02-13 06:32:32,301] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2021-02-13 06:32:32,302] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2021-02-13 06:32:32,317] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2021-02-13 06:32:32,319] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2021-02-13 06:32:32,326] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 15 samples (table) [2021-02-13 06:32:32,331] multiqc [DEBUG ] No samples found: conpair [2021-02-13 06:32:32,335] multiqc [DEBUG ] No samples found: peddy [2021-02-13 06:32:32,342] multiqc [DEBUG ] No samples found: somalier [2021-02-13 06:32:32,347] multiqc [DEBUG ] No samples found: methylQA [2021-02-13 06:32:32,356] multiqc [DEBUG ] No samples found: mosdepth [2021-02-13 06:32:32,361] multiqc [DEBUG ] No samples found: phantompeakqualtools [2021-02-13 06:32:32,364] multiqc [DEBUG ] No samples found: qualimap [2021-02-13 06:32:32,369] multiqc [DEBUG ] No samples found: preseq [2021-02-13 06:32:32,374] multiqc [DEBUG ] No samples found: quast [2021-02-13 06:32:32,378] multiqc [DEBUG ] No samples found: qorts [2021-02-13 06:32:32,382] multiqc [DEBUG ] No samples found: rna_seqc [2021-02-13 06:32:32,386] multiqc [DEBUG ] No samples found: rockhopper [2021-02-13 06:32:32,391] multiqc [DEBUG ] No samples found: rsem [2021-02-13 06:32:32,403] multiqc [DEBUG ] No samples found: rseqc [2021-02-13 06:32:32,407] multiqc [DEBUG ] No samples found: busco [2021-02-13 06:32:32,412] multiqc [DEBUG ] No samples found: goleft_indexcov [2021-02-13 06:32:32,416] multiqc [DEBUG ] No samples found: disambiguate [2021-02-13 06:32:32,421] multiqc [DEBUG ] No samples found: supernova [2021-02-13 06:32:32,435] multiqc [DEBUG ] No samples found: deeptools [2021-02-13 06:32:32,439] multiqc [DEBUG ] No samples found: sargasso [2021-02-13 06:32:32,444] multiqc [DEBUG ] No samples found: verifybamid [2021-02-13 06:32:32,451] multiqc [DEBUG ] No samples found: mirtrace [2021-02-13 06:32:32,455] multiqc [DEBUG ] No samples found: happy [2021-02-13 06:32:32,459] multiqc [DEBUG ] No samples found: mirtop [2021-02-13 06:32:32,464] multiqc [DEBUG ] No samples found: homer [2021-02-13 06:32:32,468] multiqc [DEBUG ] No samples found: macs2 [2021-02-13 06:32:32,473] multiqc [DEBUG ] No samples found: theta2 [2021-02-13 06:32:32,478] multiqc [DEBUG ] No samples found: snpeff [2021-02-13 06:32:32,484] multiqc [DEBUG ] No samples found: gatk [2021-02-13 06:32:32,489] multiqc [DEBUG ] No samples found: htseq [2021-02-13 06:32:32,495] multiqc [DEBUG ] No samples found: bcftools [2021-02-13 06:32:32,499] multiqc [DEBUG ] No samples found: featureCounts [2021-02-13 06:32:32,504] multiqc [DEBUG ] No samples found: fgbio [2021-02-13 06:32:32,519] multiqc [DEBUG ] No samples found: dragen [2021-02-13 06:32:32,523] multiqc [DEBUG ] No samples found: dedup [2021-02-13 06:32:32,528] multiqc [DEBUG ] No samples found: damageprofiler [2021-02-13 06:32:32,548] multiqc [DEBUG ] No samples found: biobambam2 [2021-02-13 06:32:32,552] multiqc [DEBUG ] No samples found: mtnucratio [2021-02-13 06:32:32,554] multiqc [DEBUG ] No samples found: picard [2021-02-13 06:32:32,558] multiqc [DEBUG ] No samples found: prokka [2021-02-13 06:32:32,564] multiqc [DEBUG ] No samples found: samblaster [2021-02-13 06:32:32,573] multiqc [DEBUG ] No samples found: samtools [2021-02-13 06:32:32,577] multiqc [DEBUG ] No samples found: sexdeterrmine [2021-02-13 06:32:32,583] multiqc [DEBUG ] No samples found: bamtools [2021-02-13 06:32:32,587] multiqc [DEBUG ] No samples found: jellyfish [2021-02-13 06:32:32,595] multiqc [DEBUG ] No samples found: vcftools [2021-02-13 06:32:32,600] multiqc [DEBUG ] No samples found: longranger [2021-02-13 06:32:32,605] multiqc [DEBUG ] No samples found: stacks [2021-02-13 06:32:32,610] multiqc [DEBUG ] No samples found: varscan2 [2021-02-13 06:32:32,624] multiqc [DEBUG ] No samples found: bbmap [2021-02-13 06:32:32,628] multiqc [DEBUG ] No samples found: bismark [2021-02-13 06:32:32,632] multiqc [DEBUG ] No samples found: biscuit [2021-02-13 06:32:32,638] multiqc [DEBUG ] No samples found: hicexplorer [2021-02-13 06:32:32,642] multiqc [DEBUG ] No samples found: hicup [2021-02-13 06:32:32,646] multiqc [DEBUG ] No samples found: hicpro [2021-02-13 06:32:32,652] multiqc [DEBUG ] No samples found: salmon [2021-02-13 06:32:32,656] multiqc [DEBUG ] No samples found: kallisto [2021-02-13 06:32:32,662] multiqc [DEBUG ] No samples found: slamdunk [2021-02-13 06:32:32,666] multiqc [DEBUG ] No samples found: star [2021-02-13 06:32:32,670] multiqc [DEBUG ] No samples found: hisat2 [2021-02-13 06:32:32,674] multiqc [DEBUG ] No samples found: tophat [2021-02-13 06:32:32,680] multiqc [DEBUG ] No samples found: bowtie2 [2021-02-13 06:32:32,685] multiqc [DEBUG ] No samples found: bowtie1 [2021-02-13 06:32:32,690] multiqc [DEBUG ] No samples found: snpsplit [2021-02-13 06:32:32,694] multiqc [DEBUG ] No samples found: kat [2021-02-13 06:32:32,698] multiqc [DEBUG ] No samples found: leehom [2021-02-13 06:32:32,703] multiqc [DEBUG ] No samples found: adapterRemoval [2021-02-13 06:32:32,706] multiqc [DEBUG ] No samples found: clipandmerge [2021-02-13 06:32:32,710] multiqc [DEBUG ] No samples found: cutadapt [2021-02-13 06:32:32,715] multiqc [DEBUG ] No samples found: flexbar [2021-02-13 06:32:32,719] multiqc [DEBUG ] No samples found: kaiju [2021-02-13 06:32:32,724] multiqc [DEBUG ] No samples found: kraken [2021-02-13 06:32:32,728] multiqc [DEBUG ] No samples found: malt [2021-02-13 06:32:32,732] multiqc [DEBUG ] No samples found: trimmomatic [2021-02-13 06:32:32,737] multiqc [DEBUG ] No samples found: sickle [2021-02-13 06:32:32,741] multiqc [DEBUG ] No samples found: skewer [2021-02-13 06:32:32,746] multiqc [DEBUG ] No samples found: sortmerna [2021-02-13 06:32:32,751] multiqc [DEBUG ] No samples found: biobloomtools [2021-02-13 06:32:32,755] multiqc [DEBUG ] No samples found: fastq_screen [2021-02-13 06:32:32,759] multiqc [DEBUG ] No samples found: afterqc [2021-02-13 06:32:32,763] multiqc [DEBUG ] No samples found: fastp [2021-02-13 06:32:34,946] multiqc.modules.fastqc.fastqc [INFO ] Found 30 reports [2021-02-13 06:32:35,140] multiqc [DEBUG ] No samples found: pycoqc [2021-02-13 06:32:35,144] multiqc [DEBUG ] No samples found: minionqc [2021-02-13 06:32:35,148] multiqc [DEBUG ] No samples found: multivcfanalyzer [2021-02-13 06:32:35,152] multiqc [DEBUG ] No samples found: clusterflow [2021-02-13 06:32:35,157] multiqc [DEBUG ] No samples found: bcl2fastq [2021-02-13 06:32:35,161] multiqc [DEBUG ] No samples found: interop [2021-02-13 06:32:35,167] multiqc [DEBUG ] No samples found: ivar [2021-02-13 06:32:35,171] multiqc [DEBUG ] No samples found: flash [2021-02-13 06:32:35,175] multiqc [DEBUG ] No samples found: seqyclean [2021-02-13 06:32:35,175] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2021-02-13 06:32:35,175] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2021-02-13 06:32:35,175] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2021-02-13 06:32:35,175] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2021-02-13 06:32:35,210] multiqc [INFO ] Compressing plot data [2021-02-13 06:32:35,656] multiqc [INFO ] Report : multiqc_report.html [2021-02-13 06:32:35,656] multiqc [INFO ] Data : multiqc_data [2021-02-13 06:32:35,657] multiqc [DEBUG ] Moving data file from '/state/partition1/job-2718776/tmpfohryeo5/multiqc_data' to '/scratch/gencore/logs/html/HFGF5BGXH/merged/multiqc_data' [2021-02-13 06:32:35,787] multiqc [INFO ] MultiQC complete