[2023-10-17 20:36:48,607] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2023-10-17 20:36:48,607] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2023-10-17 20:36:48,607] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml
[2023-10-17 20:36:48,610] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2023-10-17 20:36:48,610] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}}
[2023-10-17 20:36:48,610] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HFFVKDRX3/merged
[2023-10-17 20:36:48,806] multiqc [WARNING] MultiQC Version v1.16 now available!
[2023-10-17 20:36:48,806] multiqc [INFO ] This is MultiQC v1.9
[2023-10-17 20:36:48,806] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HFFVKDRX3/merged
[2023-10-17 20:36:48,806] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HFFVKDRX3/merged
[2023-10-17 20:36:48,806] multiqc [INFO ] Template : default
[2023-10-17 20:36:48,806] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode]
[2023-10-17 20:36:48,806] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HFFVKDRX3/merged
[2023-10-17 20:36:48,807] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2023-10-17 20:36:48,807] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-38964183/tmpfk556gmh
[2023-10-17 20:36:49,065] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_top_TCF1_fastqc.html
[2023-10-17 20:36:49,068] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_top_TCF1_fastqc.html
[2023-10-17 20:36:49,146] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_bot_TCF1_fastqc.html
[2023-10-17 20:36:49,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_bot_TCF1_fastqc.html
[2023-10-17 20:36:49,207] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,208] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-10-17 20:36:49,875] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_pre_trogo_fastqc.html
[2023-10-17 20:36:49,877] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_pre_trogo_fastqc.html
[2023-10-17 20:36:49,937] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_bot_trogo_fastqc.html
[2023-10-17 20:36:49,939] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_bot_trogo_fastqc.html
[2023-10-17 20:36:49,999] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_pre_trogo_fastqc.html
[2023-10-17 20:36:50,001] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_pre_trogo_fastqc.html
[2023-10-17 20:36:50,088] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_pre_trogo_fastqc.html
[2023-10-17 20:36:50,090] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_pre_trogo_fastqc.html
[2023-10-17 20:36:50,160] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_top_TCF1_fastqc.html
[2023-10-17 20:36:50,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_top_TCF1_fastqc.html
[2023-10-17 20:36:50,231] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,233] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,295] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,297] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,367] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_top_TCF1_fastqc.html
[2023-10-17 20:36:50,369] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_top_TCF1_fastqc.html
[2023-10-17 20:36:50,439] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_undetermined_fastqc.html
[2023-10-17 20:36:50,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_undetermined_fastqc.html
[2023-10-17 20:36:50,495] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,497] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_pre_TCF1_fastqc.html
[2023-10-17 20:36:50,621] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_pre_trogo_fastqc.html
[2023-10-17 20:36:50,623] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_pre_trogo_fastqc.html
[2023-10-17 20:36:50,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_top_trogo_fastqc.html
[2023-10-17 20:36:50,685] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_top_trogo_fastqc.html
[2023-10-17 20:36:50,765] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_bot_trogo_fastqc.html
[2023-10-17 20:36:50,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_bot_trogo_fastqc.html
[2023-10-17 20:36:50,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_bot_trogo_fastqc.html
[2023-10-17 20:36:50,841] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_bot_trogo_fastqc.html
[2023-10-17 20:36:50,900] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_bot_TCF1_fastqc.html
[2023-10-17 20:36:50,902] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_bot_TCF1_fastqc.html
[2023-10-17 20:36:50,971] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_undetermined_fastqc.html
[2023-10-17 20:36:50,973] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_undetermined_fastqc.html
[2023-10-17 20:36:51,031] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_pre_TCF1_fastqc.html
[2023-10-17 20:36:51,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor5_pre_TCF1_fastqc.html
[2023-10-17 20:36:51,092] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_top_trogo_fastqc.html
[2023-10-17 20:36:51,094] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_top_trogo_fastqc.html
[2023-10-17 20:36:51,186] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_bot_TCF1_fastqc.html
[2023-10-17 20:36:51,189] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_bot_TCF1_fastqc.html
[2023-10-17 20:36:51,251] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_bot_TCF1_fastqc.html
[2023-10-17 20:36:51,253] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_bot_TCF1_fastqc.html
[2023-10-17 20:36:51,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_top_TCF1_fastqc.html
[2023-10-17 20:36:51,324] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor5_top_TCF1_fastqc.html
[2023-10-17 20:36:51,391] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_top_trogo_fastqc.html
[2023-10-17 20:36:51,393] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_top_trogo_fastqc.html
[2023-10-17 20:36:51,461] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_top_trogo_fastqc.html
[2023-10-17 20:36:51,463] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor4_top_trogo_fastqc.html
[2023-10-17 20:36:51,525] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor2_pre_trogo_fastqc.html
[2023-10-17 20:36:51,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor2_pre_trogo_fastqc.html
[2023-10-17 20:36:51,595] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_bot_trogo_fastqc.html
[2023-10-17 20:36:51,597] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n02_Donor4_bot_trogo_fastqc.html
[2023-10-17 20:36:51,666] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor2_pre_trogo_fastqc.html
[2023-10-17 20:36:51,668] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HFFVKDRX3_n01_Donor2_pre_trogo_fastqc.html
[2023-10-17 20:36:52,075] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2
[2023-10-17 20:36:52,076] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2
[2023-10-17 20:36:52,085] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table)
[2023-10-17 20:36:52,095] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table)
[2023-10-17 20:36:52,102] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 14 samples (table)
[2023-10-17 20:36:52,117] multiqc [DEBUG ] No samples found: conpair
[2023-10-17 20:36:52,126] multiqc [DEBUG ] No samples found: peddy
[2023-10-17 20:36:52,132] multiqc [DEBUG ] No samples found: somalier
[2023-10-17 20:36:52,138] multiqc [DEBUG ] No samples found: methylQA
[2023-10-17 20:36:52,147] multiqc [DEBUG ] No samples found: mosdepth
[2023-10-17 20:36:52,151] multiqc [DEBUG ] No samples found: phantompeakqualtools
[2023-10-17 20:36:52,155] multiqc [DEBUG ] No samples found: qualimap
[2023-10-17 20:36:52,160] multiqc [DEBUG ] No samples found: preseq
[2023-10-17 20:36:52,165] multiqc [DEBUG ] No samples found: quast
[2023-10-17 20:36:52,170] multiqc [DEBUG ] No samples found: qorts
[2023-10-17 20:36:52,175] multiqc [DEBUG ] No samples found: rna_seqc
[2023-10-17 20:36:52,180] multiqc [DEBUG ] No samples found: rockhopper
[2023-10-17 20:36:52,185] multiqc [DEBUG ] No samples found: rsem
[2023-10-17 20:36:52,201] multiqc [DEBUG ] No samples found: rseqc
[2023-10-17 20:36:52,205] multiqc [DEBUG ] No samples found: busco
[2023-10-17 20:36:52,211] multiqc [DEBUG ] No samples found: goleft_indexcov
[2023-10-17 20:36:52,216] multiqc [DEBUG ] No samples found: disambiguate
[2023-10-17 20:36:52,222] multiqc [DEBUG ] No samples found: supernova
[2023-10-17 20:36:52,234] multiqc [DEBUG ] No samples found: deeptools
[2023-10-17 20:36:52,239] multiqc [DEBUG ] No samples found: sargasso
[2023-10-17 20:36:52,244] multiqc [DEBUG ] No samples found: verifybamid
[2023-10-17 20:36:52,248] multiqc [DEBUG ] No samples found: mirtrace
[2023-10-17 20:36:52,253] multiqc [DEBUG ] No samples found: happy
[2023-10-17 20:36:52,258] multiqc [DEBUG ] No samples found: mirtop
[2023-10-17 20:36:52,264] multiqc [DEBUG ] No samples found: homer
[2023-10-17 20:36:52,269] multiqc [DEBUG ] No samples found: macs2
[2023-10-17 20:36:52,274] multiqc [DEBUG ] No samples found: theta2
[2023-10-17 20:36:52,280] multiqc [DEBUG ] No samples found: snpeff
[2023-10-17 20:36:52,306] multiqc [DEBUG ] No samples found: gatk
[2023-10-17 20:36:52,311] multiqc [DEBUG ] No samples found: htseq
[2023-10-17 20:36:52,317] multiqc [DEBUG ] No samples found: bcftools
[2023-10-17 20:36:52,322] multiqc [DEBUG ] No samples found: featureCounts
[2023-10-17 20:36:52,328] multiqc [DEBUG ] No samples found: fgbio
[2023-10-17 20:36:52,341] multiqc [DEBUG ] No samples found: dragen
[2023-10-17 20:36:52,347] multiqc [DEBUG ] No samples found: dedup
[2023-10-17 20:36:52,352] multiqc [DEBUG ] No samples found: damageprofiler
[2023-10-17 20:36:52,374] multiqc [DEBUG ] No samples found: biobambam2
[2023-10-17 20:36:52,380] multiqc [DEBUG ] No samples found: mtnucratio
[2023-10-17 20:36:52,382] multiqc [DEBUG ] No samples found: picard
[2023-10-17 20:36:52,387] multiqc [DEBUG ] No samples found: prokka
[2023-10-17 20:36:52,396] multiqc [DEBUG ] No samples found: samblaster
[2023-10-17 20:36:52,404] multiqc [DEBUG ] No samples found: samtools
[2023-10-17 20:36:52,409] multiqc [DEBUG ] No samples found: sexdeterrmine
[2023-10-17 20:36:52,414] multiqc [DEBUG ] No samples found: bamtools
[2023-10-17 20:36:52,420] multiqc [DEBUG ] No samples found: jellyfish
[2023-10-17 20:36:52,427] multiqc [DEBUG ] No samples found: vcftools
[2023-10-17 20:36:52,432] multiqc [DEBUG ] No samples found: longranger
[2023-10-17 20:36:52,437] multiqc [DEBUG ] No samples found: stacks
[2023-10-17 20:36:52,442] multiqc [DEBUG ] No samples found: varscan2
[2023-10-17 20:36:52,484] multiqc [DEBUG ] No samples found: bbmap
[2023-10-17 20:36:52,493] multiqc [DEBUG ] No samples found: bismark
[2023-10-17 20:36:52,499] multiqc [DEBUG ] No samples found: biscuit
[2023-10-17 20:36:52,504] multiqc [DEBUG ] No samples found: hicexplorer
[2023-10-17 20:36:52,509] multiqc [DEBUG ] No samples found: hicup
[2023-10-17 20:36:52,514] multiqc [DEBUG ] No samples found: hicpro
[2023-10-17 20:36:52,519] multiqc [DEBUG ] No samples found: salmon
[2023-10-17 20:36:52,524] multiqc [DEBUG ] No samples found: kallisto
[2023-10-17 20:36:52,530] multiqc [DEBUG ] No samples found: slamdunk
[2023-10-17 20:36:52,536] multiqc [DEBUG ] No samples found: star
[2023-10-17 20:36:52,540] multiqc [DEBUG ] No samples found: hisat2
[2023-10-17 20:36:52,545] multiqc [DEBUG ] No samples found: tophat
[2023-10-17 20:36:52,550] multiqc [DEBUG ] No samples found: bowtie2
[2023-10-17 20:36:52,556] multiqc [DEBUG ] No samples found: bowtie1
[2023-10-17 20:36:52,561] multiqc [DEBUG ] No samples found: snpsplit
[2023-10-17 20:36:52,566] multiqc [DEBUG ] No samples found: kat
[2023-10-17 20:36:52,570] multiqc [DEBUG ] No samples found: leehom
[2023-10-17 20:36:52,575] multiqc [DEBUG ] No samples found: adapterRemoval
[2023-10-17 20:36:52,580] multiqc [DEBUG ] No samples found: clipandmerge
[2023-10-17 20:36:52,585] multiqc [DEBUG ] No samples found: cutadapt
[2023-10-17 20:36:52,589] multiqc [DEBUG ] No samples found: flexbar
[2023-10-17 20:36:52,594] multiqc [DEBUG ] No samples found: kaiju
[2023-10-17 20:36:52,599] multiqc [DEBUG ] No samples found: kraken
[2023-10-17 20:36:52,604] multiqc [DEBUG ] No samples found: malt
[2023-10-17 20:36:52,609] multiqc [DEBUG ] No samples found: trimmomatic
[2023-10-17 20:36:52,614] multiqc [DEBUG ] No samples found: sickle
[2023-10-17 20:36:52,624] multiqc [DEBUG ] No samples found: skewer
[2023-10-17 20:36:52,628] multiqc [DEBUG ] No samples found: sortmerna
[2023-10-17 20:36:52,633] multiqc [DEBUG ] No samples found: biobloomtools
[2023-10-17 20:36:52,639] multiqc [DEBUG ] No samples found: fastq_screen
[2023-10-17 20:36:52,644] multiqc [DEBUG ] No samples found: afterqc
[2023-10-17 20:36:52,649] multiqc [DEBUG ] No samples found: fastp
[2023-10-17 20:36:53,587] multiqc.modules.fastqc.fastqc [INFO ] Found 28 reports
[2023-10-17 20:36:53,856] multiqc [DEBUG ] No samples found: pycoqc
[2023-10-17 20:36:53,863] multiqc [DEBUG ] No samples found: minionqc
[2023-10-17 20:36:53,868] multiqc [DEBUG ] No samples found: multivcfanalyzer
[2023-10-17 20:36:53,873] multiqc [DEBUG ] No samples found: clusterflow
[2023-10-17 20:36:53,878] multiqc [DEBUG ] No samples found: bcl2fastq
[2023-10-17 20:36:53,883] multiqc [DEBUG ] No samples found: interop
[2023-10-17 20:36:53,888] multiqc [DEBUG ] No samples found: ivar
[2023-10-17 20:36:53,894] multiqc [DEBUG ] No samples found: flash
[2023-10-17 20:36:53,899] multiqc [DEBUG ] No samples found: seqyclean
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,899] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'.
[2023-10-17 20:36:53,900] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'.
[2023-10-17 20:36:53,934] multiqc [INFO ] Compressing plot data
[2023-10-17 20:36:54,421] multiqc [INFO ] Report : multiqc_report.html
[2023-10-17 20:36:54,422] multiqc [INFO ] Data : multiqc_data
[2023-10-17 20:36:54,422] multiqc [DEBUG ] Moving data file from '/state/partition1/job-38964183/tmpfk556gmh/multiqc_data' to '/scratch/gencore/logs/html/HFFVKDRX3/merged/multiqc_data'
[2023-10-17 20:36:54,561] multiqc [INFO ] MultiQC complete