FastQCFastQC Report
Mon 15 Nov 2021
HFFJTBGXK_n01_F3V-2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFFJTBGXK_n01_F3V-2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5193103
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGTGTATCAACGTATGAATTTGTGTGATGTGATGTACCCGTGCTATTC75650.14567398335831197No Hit
TGTGTCTATATGTATGTACGTGTCCTGTGATGTGATGATGTACCTGTGCT53880.10375299700391076No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)