FastQCFastQC Report
Mon 15 Nov 2021
HFFJTBGXK_n01_BA-12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFFJTBGXK_n01_BA-12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2539790
Sequences flagged as poor quality0
Sequence length76
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCATATAATTTCTGTTGAATTACGTTAAGCATGTAATAATTAACATG69660.2742746447540938No Hit
CAACACTACAAAAAAGAAACACATACTCTCTCTCAATTCATATTTCCTCA27270.10737108186109874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)