FastQCFastQC Report
Sat 2 Jul 2022
HFCVLBGXM_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHFCVLBGXM_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429641587
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCGCCGTATCAT208898144.8621489706954275Illumina Single End PCR Primer 1 (100% over 16bp)
ACCGGACACTCACAGG4392070.10222637037228895No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)