HFCJ7BCXX_l02n01_bgm26.35100000065512.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HFCJ7BCXX_l02n01_bgm26.35100000065512.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28232388
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	388792	1.3771134060639858	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCTGA	42350	42.893402	16
GATCGGA	43130	42.8377	1
CGATGTA	41655	42.815395	34
ATCGGAA	43280	42.74627	2
ACACGTC	42740	42.654663	13
ACCGATG	41875	42.638813	32
CACCGAT	42045	42.578785	31
ACGTCTG	42805	42.495285	15
CCGATGT	42035	42.46581	33
TCTCGTA	42125	42.423077	41
CTCGTAT	42145	42.40294	42
TATCTCG	42200	42.33146	39
GTCACCG	42475	42.26956	29
CGTATGC	42435	42.235104	44
TCGTATG	42435	42.18739	43
TCGGAAG	43980	41.989174	3
CGGAAGA	43995	41.90837	4
ATCTCGT	42760	41.782555	40
TCACCGA	43035	41.662018	30
CACGTCT	43830	41.55796	14