Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HFC3LDRX5_l01_n01_AT006 HFC3LDRX5_l01_n01_AT006.fastq.gz Conventional base calls Sanger / Illumina 1.9 8377505.0 0.0 99.0 49.0 50.44512280429005 99.0 pass pass pass pass warn warn pass pass warn warn pass HFC3LDRX5_l01_n01_AT009 HFC3LDRX5_l01_n01_AT009.fastq.gz Conventional base calls Sanger / Illumina 1.9 17998206.0 0.0 99.0 49.0 44.259293720166866 99.0 pass pass pass pass warn warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT011C HFC3LDRX5_l01_n01_AT011C.fastq.gz Conventional base calls Sanger / Illumina 1.9 122391610.0 0.0 99.0 42.0 32.20879612595205 99.0 pass pass pass pass fail pass pass pass fail pass warn HFC3LDRX5_l01_n01_AT012C HFC3LDRX5_l01_n01_AT012C.fastq.gz Conventional base calls Sanger / Illumina 1.9 154000075.0 0.0 99.0 42.0 29.863699395843163 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n01_AT014 HFC3LDRX5_l01_n01_AT014.fastq.gz Conventional base calls Sanger / Illumina 1.9 55020197.0 0.0 99.0 42.0 40.11593530296646 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n01_AT021 HFC3LDRX5_l01_n01_AT021.fastq.gz Conventional base calls Sanger / Illumina 1.9 35491848.0 0.0 99.0 42.0 52.62140304508538 99.0 pass pass pass pass fail pass pass pass warn pass pass HFC3LDRX5_l01_n01_AT022.2 HFC3LDRX5_l01_n01_AT022.2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19480214.0 0.0 99.0 43.0 52.15378503280228 99.0 pass pass pass pass fail warn pass pass warn pass pass HFC3LDRX5_l01_n01_AT027C HFC3LDRX5_l01_n01_AT027C.fastq.gz Conventional base calls Sanger / Illumina 1.9 37505185.0 0.0 99.0 42.0 47.206636848391305 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n01_AT029 HFC3LDRX5_l01_n01_AT029.fastq.gz Conventional base calls Sanger / Illumina 1.9 34871132.0 0.0 99.0 43.0 32.34281515561197 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT030 HFC3LDRX5_l01_n01_AT030.fastq.gz Conventional base calls Sanger / Illumina 1.9 43440856.0 0.0 99.0 42.0 33.88594062597928 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n01_AT032 HFC3LDRX5_l01_n01_AT032.fastq.gz Conventional base calls Sanger / Illumina 1.9 22855623.0 0.0 99.0 41.0 45.27776226845915 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n01_AT033 HFC3LDRX5_l01_n01_AT033.fastq.gz Conventional base calls Sanger / Illumina 1.9 23776000.0 0.0 99.0 42.0 43.25995092605748 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n01_AT035 HFC3LDRX5_l01_n01_AT035.fastq.gz Conventional base calls Sanger / Illumina 1.9 37931919.0 0.0 99.0 41.0 41.30894166152506 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n01_AT044 HFC3LDRX5_l01_n01_AT044.fastq.gz Conventional base calls Sanger / Illumina 1.9 17808299.0 0.0 99.0 42.0 50.36512033158599 99.0 pass pass pass pass fail warn pass pass warn pass pass HFC3LDRX5_l01_n01_AT065 HFC3LDRX5_l01_n01_AT065.fastq.gz Conventional base calls Sanger / Illumina 1.9 31559534.0 0.0 99.0 48.0 26.570813693778767 99.0 pass pass pass pass fail pass pass pass fail warn pass HFC3LDRX5_l01_n01_AT068 HFC3LDRX5_l01_n01_AT068.fastq.gz Conventional base calls Sanger / Illumina 1.9 41342463.0 0.0 99.0 45.0 41.60161359517937 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n01_AT069 HFC3LDRX5_l01_n01_AT069.fastq.gz Conventional base calls Sanger / Illumina 1.9 25998581.0 0.0 99.0 44.0 46.32058086123345 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT071 HFC3LDRX5_l01_n01_AT071.fastq.gz Conventional base calls Sanger / Illumina 1.9 25895905.0 0.0 99.0 44.0 43.25938150755448 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT072 HFC3LDRX5_l01_n01_AT072.fastq.gz Conventional base calls Sanger / Illumina 1.9 21114309.0 0.0 99.0 43.0 34.90560122190443 99.0 pass pass pass pass fail pass pass pass fail warn warn HFC3LDRX5_l01_n01_AT077 HFC3LDRX5_l01_n01_AT077.fastq.gz Conventional base calls Sanger / Illumina 1.9 20276601.0 0.0 99.0 47.0 33.02760584914561 99.0 pass pass pass pass fail pass pass pass fail warn pass HFC3LDRX5_l01_n01_AT078 HFC3LDRX5_l01_n01_AT078.fastq.gz Conventional base calls Sanger / Illumina 1.9 4557589.0 0.0 99.0 50.0 27.498622212211853 99.0 pass pass pass pass warn fail pass pass fail fail warn HFC3LDRX5_l01_n01_AT082 HFC3LDRX5_l01_n01_AT082.fastq.gz Conventional base calls Sanger / Illumina 1.9 2486007.0 0.0 99.0 50.0 30.260084764335144 99.0 pass pass pass pass warn warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT101 HFC3LDRX5_l01_n01_AT101.fastq.gz Conventional base calls Sanger / Illumina 1.9 10622130.0 0.0 99.0 48.0 24.339134313072716 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n01_AT102 HFC3LDRX5_l01_n01_AT102.fastq.gz Conventional base calls Sanger / Illumina 1.9 20641275.0 0.0 99.0 45.0 31.345016253988504 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n01_undetermined HFC3LDRX5_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 75720161.0 0.0 99.0 43.0 15.117777948421827 99.0 pass pass pass pass pass fail pass pass fail pass pass HFC3LDRX5_l01_n02_AT006 HFC3LDRX5_l01_n02_AT006.fastq.gz Conventional base calls Sanger / Illumina 1.9 8377505.0 0.0 99.0 49.0 53.35410450777819 99.0 pass pass pass pass warn warn pass pass warn warn pass HFC3LDRX5_l01_n02_AT009 HFC3LDRX5_l01_n02_AT009.fastq.gz Conventional base calls Sanger / Illumina 1.9 17998206.0 0.0 99.0 49.0 46.787347222153066 99.0 pass pass pass pass warn warn pass pass fail warn pass HFC3LDRX5_l01_n02_AT011C HFC3LDRX5_l01_n02_AT011C.fastq.gz Conventional base calls Sanger / Illumina 1.9 122391610.0 0.0 99.0 42.0 34.05094505668984 99.0 pass pass pass pass fail pass pass pass fail pass warn HFC3LDRX5_l01_n02_AT012C HFC3LDRX5_l01_n02_AT012C.fastq.gz Conventional base calls Sanger / Illumina 1.9 154000075.0 0.0 99.0 42.0 31.69856973559424 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT014 HFC3LDRX5_l01_n02_AT014.fastq.gz Conventional base calls Sanger / Illumina 1.9 55020197.0 0.0 99.0 42.0 42.195383408096134 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT021 HFC3LDRX5_l01_n02_AT021.fastq.gz Conventional base calls Sanger / Illumina 1.9 35491848.0 0.0 99.0 42.0 53.96225063360861 99.0 pass pass pass pass fail pass pass pass warn pass pass HFC3LDRX5_l01_n02_AT022.2 HFC3LDRX5_l01_n02_AT022.2.fastq.gz Conventional base calls Sanger / Illumina 1.9 19480214.0 0.0 99.0 43.0 55.26660493055996 99.0 pass pass pass pass fail warn pass pass warn pass pass HFC3LDRX5_l01_n02_AT027C HFC3LDRX5_l01_n02_AT027C.fastq.gz Conventional base calls Sanger / Illumina 1.9 37505185.0 0.0 99.0 42.0 48.579032388563846 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT029 HFC3LDRX5_l01_n02_AT029.fastq.gz Conventional base calls Sanger / Illumina 1.9 34871132.0 0.0 99.0 43.0 34.40192349624143 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_AT030 HFC3LDRX5_l01_n02_AT030.fastq.gz Conventional base calls Sanger / Illumina 1.9 43440856.0 0.0 99.0 42.0 35.783584549898265 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_AT032 HFC3LDRX5_l01_n02_AT032.fastq.gz Conventional base calls Sanger / Illumina 1.9 22855623.0 0.0 99.0 41.0 47.01563597769952 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_AT033 HFC3LDRX5_l01_n02_AT033.fastq.gz Conventional base calls Sanger / Illumina 1.9 23776000.0 0.0 99.0 42.0 45.121634931083946 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT035 HFC3LDRX5_l01_n02_AT035.fastq.gz Conventional base calls Sanger / Illumina 1.9 37931919.0 0.0 99.0 41.0 42.70097019794819 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT044 HFC3LDRX5_l01_n02_AT044.fastq.gz Conventional base calls Sanger / Illumina 1.9 17808299.0 0.0 99.0 42.0 52.00147079947182 99.0 pass pass pass pass fail warn pass pass warn pass pass HFC3LDRX5_l01_n02_AT065 HFC3LDRX5_l01_n02_AT065.fastq.gz Conventional base calls Sanger / Illumina 1.9 31559534.0 0.0 99.0 48.0 28.856523632187393 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n02_AT068 HFC3LDRX5_l01_n02_AT068.fastq.gz Conventional base calls Sanger / Illumina 1.9 41342463.0 0.0 99.0 45.0 43.59972546487771 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_AT069 HFC3LDRX5_l01_n02_AT069.fastq.gz Conventional base calls Sanger / Illumina 1.9 25998581.0 0.0 99.0 44.0 48.21143391399991 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n02_AT071 HFC3LDRX5_l01_n02_AT071.fastq.gz Conventional base calls Sanger / Illumina 1.9 25895905.0 0.0 99.0 44.0 44.664982825360525 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_AT072 HFC3LDRX5_l01_n02_AT072.fastq.gz Conventional base calls Sanger / Illumina 1.9 21114309.0 0.0 99.0 43.0 36.68381744310826 99.0 pass pass pass pass fail pass pass pass fail warn warn HFC3LDRX5_l01_n02_AT077 HFC3LDRX5_l01_n02_AT077.fastq.gz Conventional base calls Sanger / Illumina 1.9 20276601.0 0.0 99.0 47.0 35.287056370698224 99.0 pass pass pass pass fail pass pass pass fail pass pass HFC3LDRX5_l01_n02_AT078 HFC3LDRX5_l01_n02_AT078.fastq.gz Conventional base calls Sanger / Illumina 1.9 4557589.0 0.0 99.0 52.0 36.48554632169401 99.0 pass pass pass pass warn fail pass pass fail warn warn HFC3LDRX5_l01_n02_AT082 HFC3LDRX5_l01_n02_AT082.fastq.gz Conventional base calls Sanger / Illumina 1.9 2486007.0 0.0 99.0 51.0 35.38508080802135 99.0 pass pass pass pass warn fail pass pass fail warn pass HFC3LDRX5_l01_n02_AT101 HFC3LDRX5_l01_n02_AT101.fastq.gz Conventional base calls Sanger / Illumina 1.9 10622130.0 0.0 99.0 48.0 25.993310210520676 99.0 pass pass pass pass fail warn pass pass fail warn pass HFC3LDRX5_l01_n02_AT102 HFC3LDRX5_l01_n02_AT102.fastq.gz Conventional base calls Sanger / Illumina 1.9 20641275.0 0.0 99.0 45.0 33.10702443098148 99.0 pass pass pass pass fail warn pass pass fail pass pass HFC3LDRX5_l01_n02_undetermined HFC3LDRX5_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 75720161.0 0.0 99.0 43.0 20.606434173415757 99.0 pass pass pass pass pass fail pass pass fail pass pass