HF7VNBGX5_n01_ox130_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HF7VNBGX5_n01_ox130_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8697868
Sequences flagged as poor quality	0
Sequence length	75
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGGCGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	19884	0.2286077461741199	RNA PCR Primer, Index 33 (100% over 43bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCAGGCG	3920	55.25486	33
TATGCCG	3975	52.529083	46
CGTATGC	4010	52.147972	44
CAGGCGA	4400	48.2083	34
GTATGCC	4450	47.45867	45
ATGCCGT	4445	46.90177	47
GCACACG	4900	45.962803	11
TCGTATG	4560	45.77989	43
ACGTCTG	5205	43.202984	15
ACCAGGC	5030	42.991634	32
CACACGT	5240	42.84909	12
ACACGTC	5245	42.67648	13
AGGCGAT	5205	40.156075	35
TGCCGTC	5270	39.822594	48
GGCGATC	4835	39.520973	36
CACGTCT	5700	39.390865	14
CTCGTAT	5020	38.14661	42
AGCACAC	6015	37.95961	10
GCGATCT	5130	36.984913	37
GCCGTCT	5700	36.21328	49