FastQCFastQC Report
Sun 7 Nov 2021
HF7KYBGXK_n01_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHF7KYBGXK_n01_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24309295
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATAGCACCAGGCCCGCGAGACACTCCTGAGCCCCCGTCACTAGGTCAC538800.2216436140990514No Hit
CCGCAACCCTGTCCCTTCTCTTCTGGAGAGCAGAGAACCCGGGGGCTCCC324020.1332905787683271No Hit
CTCCTGAGCCCCCGTCACTAGGTCACCGCAACCCTGTCCCTTCTCTTCTG319910.13159986745810603No Hit
CTTAATGACTGAGCCGCCCAGGCGCCCCTCATCCCAAGATGTTTTAACGA264210.10868682123442905No Hit
TTCCAGGAGTGCGTGGGGCCTCTCCTGGCAAAGGAACAGTTTCCCTCTAG253530.10429344001954809No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)