Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HF3T2DRX3_n01_NMD_01 HF3T2DRX3_n01_NMD_01.fastq.gz Conventional base calls Sanger / Illumina 1.9 18457871.0 0.0 101.0 47.0 31.384752936474413 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_02 HF3T2DRX3_n01_NMD_02.fastq.gz Conventional base calls Sanger / Illumina 1.9 30195601.0 0.0 101.0 47.0 23.9485668998485 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_03 HF3T2DRX3_n01_NMD_03.fastq.gz Conventional base calls Sanger / Illumina 1.9 41444292.0 0.0 101.0 48.0 27.848079412927035 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_04 HF3T2DRX3_n01_NMD_04.fastq.gz Conventional base calls Sanger / Illumina 1.9 45349040.0 0.0 101.0 48.0 26.44753838247094 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_05 HF3T2DRX3_n01_NMD_05.fastq.gz Conventional base calls Sanger / Illumina 1.9 34551336.0 0.0 101.0 47.0 26.451825784160043 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_06 HF3T2DRX3_n01_NMD_06.fastq.gz Conventional base calls Sanger / Illumina 1.9 32364428.0 0.0 101.0 47.0 23.074530124141443 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_07 HF3T2DRX3_n01_NMD_07.fastq.gz Conventional base calls Sanger / Illumina 1.9 26838077.0 0.0 101.0 48.0 22.18560969900366 101.0 pass pass pass pass warn fail pass pass fail warn warn HF3T2DRX3_n01_NMD_08 HF3T2DRX3_n01_NMD_08.fastq.gz Conventional base calls Sanger / Illumina 1.9 8963381.0 0.0 101.0 49.0 27.32846405672497 101.0 pass pass pass pass warn fail pass pass fail fail warn HF3T2DRX3_n01_NMD_09 HF3T2DRX3_n01_NMD_09.fastq.gz Conventional base calls Sanger / Illumina 1.9 30508013.0 0.0 101.0 46.0 28.14006759979107 101.0 pass pass pass pass fail warn pass pass fail warn pass HF3T2DRX3_n01_NMD_10 HF3T2DRX3_n01_NMD_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 23222749.0 0.0 101.0 46.0 32.08750458713516 101.0 pass pass pass pass fail fail pass pass fail pass pass HF3T2DRX3_n01_NMD_11 HF3T2DRX3_n01_NMD_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 34370424.0 0.0 101.0 47.0 27.84438306367647 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_12 HF3T2DRX3_n01_NMD_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 30454638.0 0.0 101.0 48.0 27.07072035458782 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_13 HF3T2DRX3_n01_NMD_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 32267808.0 0.0 101.0 48.0 26.810059465216558 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n01_NMD_14 HF3T2DRX3_n01_NMD_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 22085043.0 0.0 101.0 48.0 28.812394228893805 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n01_NMD_15 HF3T2DRX3_n01_NMD_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 6261097.0 0.0 101.0 48.0 37.1335676953565 101.0 pass pass pass pass warn fail pass pass fail warn pass HF3T2DRX3_n01_NMD_17 HF3T2DRX3_n01_NMD_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 4599858.0 0.0 101.0 49.0 46.02545898082433 101.0 pass pass pass pass warn fail pass pass fail fail fail HF3T2DRX3_n01_NMD_19 HF3T2DRX3_n01_NMD_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 33639908.0 0.0 101.0 47.0 28.005148768837003 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_NMD_20 HF3T2DRX3_n01_NMD_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 28834698.0 0.0 101.0 47.0 29.254485243796026 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n01_SF_01 HF3T2DRX3_n01_SF_01.fastq.gz Conventional base calls Sanger / Illumina 1.9 60816689.0 0.0 101.0 46.0 24.815520205945763 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_02 HF3T2DRX3_n01_SF_02.fastq.gz Conventional base calls Sanger / Illumina 1.9 39740085.0 0.0 101.0 44.0 23.93398489147407 101.0 pass pass pass pass fail warn pass pass fail pass pass HF3T2DRX3_n01_SF_03 HF3T2DRX3_n01_SF_03.fastq.gz Conventional base calls Sanger / Illumina 1.9 38875714.0 0.0 101.0 46.0 27.051235313109384 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_04 HF3T2DRX3_n01_SF_04.fastq.gz Conventional base calls Sanger / Illumina 1.9 43925240.0 0.0 101.0 45.0 27.332601127623235 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_05 HF3T2DRX3_n01_SF_05.fastq.gz Conventional base calls Sanger / Illumina 1.9 62344837.0 0.0 101.0 46.0 22.07977315532837 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_06 HF3T2DRX3_n01_SF_06.fastq.gz Conventional base calls Sanger / Illumina 1.9 35574175.0 0.0 101.0 44.0 29.203706183305993 101.0 pass pass pass pass fail warn pass pass fail pass pass HF3T2DRX3_n01_SF_07 HF3T2DRX3_n01_SF_07.fastq.gz Conventional base calls Sanger / Illumina 1.9 41090552.0 0.0 101.0 45.0 23.495577207694005 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_08 HF3T2DRX3_n01_SF_08.fastq.gz Conventional base calls Sanger / Illumina 1.9 47441008.0 0.0 101.0 45.0 18.815110549466095 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_09 HF3T2DRX3_n01_SF_09.fastq.gz Conventional base calls Sanger / Illumina 1.9 41272723.0 0.0 101.0 44.0 16.155966424246603 101.0 pass pass pass pass fail warn pass pass fail warn pass HF3T2DRX3_n01_SF_10 HF3T2DRX3_n01_SF_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 55817558.0 0.0 101.0 46.0 20.763053896548143 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_11 HF3T2DRX3_n01_SF_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 49798247.0 0.0 101.0 46.0 21.50938071049639 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_SF_12 HF3T2DRX3_n01_SF_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 26154799.0 0.0 101.0 46.0 22.21223486966843 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n01_undetermined HF3T2DRX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 27180269.0 0.0 101.0 43.0 29.472534468487076 101.0 pass pass pass pass pass fail pass pass fail pass pass HF3T2DRX3_n02_NMD_01 HF3T2DRX3_n02_NMD_01.fastq.gz Conventional base calls Sanger / Illumina 1.9 18457871.0 0.0 101.0 47.0 34.91329005550195 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_02 HF3T2DRX3_n02_NMD_02.fastq.gz Conventional base calls Sanger / Illumina 1.9 30195601.0 0.0 101.0 47.0 25.80817921139405 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_03 HF3T2DRX3_n02_NMD_03.fastq.gz Conventional base calls Sanger / Illumina 1.9 41444292.0 0.0 101.0 48.0 29.10202124730074 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_04 HF3T2DRX3_n02_NMD_04.fastq.gz Conventional base calls Sanger / Illumina 1.9 45349040.0 0.0 101.0 48.0 27.918901848676065 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_05 HF3T2DRX3_n02_NMD_05.fastq.gz Conventional base calls Sanger / Illumina 1.9 34551336.0 0.0 101.0 47.0 28.54200543922075 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_06 HF3T2DRX3_n02_NMD_06.fastq.gz Conventional base calls Sanger / Illumina 1.9 32364428.0 0.0 101.0 47.0 25.074228451924686 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_07 HF3T2DRX3_n02_NMD_07.fastq.gz Conventional base calls Sanger / Illumina 1.9 26838077.0 0.0 101.0 48.0 24.16248834086014 101.0 pass pass pass pass warn fail pass pass fail warn warn HF3T2DRX3_n02_NMD_08 HF3T2DRX3_n02_NMD_08.fastq.gz Conventional base calls Sanger / Illumina 1.9 8963381.0 0.0 101.0 49.0 32.73160046793751 101.0 pass pass pass pass warn fail pass pass fail warn warn HF3T2DRX3_n02_NMD_09 HF3T2DRX3_n02_NMD_09.fastq.gz Conventional base calls Sanger / Illumina 1.9 30508013.0 0.0 101.0 46.0 31.05144370475902 101.0 pass pass pass pass fail warn pass pass fail warn pass HF3T2DRX3_n02_NMD_10 HF3T2DRX3_n02_NMD_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 23222749.0 0.0 101.0 46.0 33.855911815489236 101.0 pass pass pass pass fail warn pass pass fail pass pass HF3T2DRX3_n02_NMD_11 HF3T2DRX3_n02_NMD_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 34370424.0 0.0 101.0 47.0 29.94871524458416 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_12 HF3T2DRX3_n02_NMD_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 30454638.0 0.0 101.0 48.0 29.48082897571094 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_13 HF3T2DRX3_n02_NMD_13.fastq.gz Conventional base calls Sanger / Illumina 1.9 32267808.0 0.0 101.0 48.0 28.954510687445072 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n02_NMD_14 HF3T2DRX3_n02_NMD_14.fastq.gz Conventional base calls Sanger / Illumina 1.9 22085043.0 0.0 101.0 48.0 31.15242979534906 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n02_NMD_15 HF3T2DRX3_n02_NMD_15.fastq.gz Conventional base calls Sanger / Illumina 1.9 6261097.0 0.0 101.0 48.0 39.88414056762147 101.0 pass pass pass pass warn fail pass pass fail warn pass HF3T2DRX3_n02_NMD_17 HF3T2DRX3_n02_NMD_17.fastq.gz Conventional base calls Sanger / Illumina 1.9 4599858.0 0.0 101.0 49.0 51.08104136426713 101.0 pass pass pass pass warn fail pass pass warn warn fail HF3T2DRX3_n02_NMD_19 HF3T2DRX3_n02_NMD_19.fastq.gz Conventional base calls Sanger / Illumina 1.9 33639908.0 0.0 101.0 47.0 29.733293599334402 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_NMD_20 HF3T2DRX3_n02_NMD_20.fastq.gz Conventional base calls Sanger / Illumina 1.9 28834698.0 0.0 101.0 47.0 31.208099430114906 101.0 pass pass pass pass fail fail pass pass fail warn warn HF3T2DRX3_n02_SF_01 HF3T2DRX3_n02_SF_01.fastq.gz Conventional base calls Sanger / Illumina 1.9 60816689.0 0.0 101.0 46.0 26.40273262222193 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_02 HF3T2DRX3_n02_SF_02.fastq.gz Conventional base calls Sanger / Illumina 1.9 39740085.0 0.0 101.0 44.0 25.694622858259226 101.0 pass pass pass pass fail warn pass pass fail pass pass HF3T2DRX3_n02_SF_03 HF3T2DRX3_n02_SF_03.fastq.gz Conventional base calls Sanger / Illumina 1.9 38875714.0 0.0 101.0 46.0 28.91488604403143 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_04 HF3T2DRX3_n02_SF_04.fastq.gz Conventional base calls Sanger / Illumina 1.9 43925240.0 0.0 101.0 45.0 28.83101653678692 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_05 HF3T2DRX3_n02_SF_05.fastq.gz Conventional base calls Sanger / Illumina 1.9 62344837.0 0.0 101.0 46.0 23.63617450381507 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_06 HF3T2DRX3_n02_SF_06.fastq.gz Conventional base calls Sanger / Illumina 1.9 35574175.0 0.0 101.0 44.0 31.229722068755677 101.0 pass pass pass pass fail warn pass pass fail pass pass HF3T2DRX3_n02_SF_07 HF3T2DRX3_n02_SF_07.fastq.gz Conventional base calls Sanger / Illumina 1.9 41090552.0 0.0 101.0 45.0 25.90489320677668 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_08 HF3T2DRX3_n02_SF_08.fastq.gz Conventional base calls Sanger / Illumina 1.9 47441008.0 0.0 101.0 45.0 20.519969198336856 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_09 HF3T2DRX3_n02_SF_09.fastq.gz Conventional base calls Sanger / Illumina 1.9 41272723.0 0.0 101.0 44.0 20.377802426739915 101.0 pass pass pass pass fail warn pass pass fail warn pass HF3T2DRX3_n02_SF_10 HF3T2DRX3_n02_SF_10.fastq.gz Conventional base calls Sanger / Illumina 1.9 55817558.0 0.0 101.0 46.0 22.620657521187283 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_11 HF3T2DRX3_n02_SF_11.fastq.gz Conventional base calls Sanger / Illumina 1.9 49798247.0 0.0 101.0 46.0 23.556736504351875 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_SF_12 HF3T2DRX3_n02_SF_12.fastq.gz Conventional base calls Sanger / Illumina 1.9 26154799.0 0.0 101.0 46.0 23.873846681444153 101.0 pass pass pass pass fail fail pass pass fail warn pass HF3T2DRX3_n02_undetermined HF3T2DRX3_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 27180269.0 0.0 101.0 43.0 33.78186945269764 101.0 pass pass pass pass warn fail pass pass fail warn pass