HF2CNAFX2_n01_RPE-1_WT_04.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HF2CNAFX2_n01_RPE-1_WT_04.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13685615
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA	38245	0.27945401065279124	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	28270	0.20656726058712016	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	26909	0.19662251203179396	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	20669	0.1510271916899606	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	18083	0.13213143874060462	No Hit
CTCATTTGGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTC	16527	0.12076183642459619	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	16419	0.11997268664944907	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGATCG	2150	46.23508	70
TATGCCG	1575	46.221027	48
GTCGGTT	2275	41.556976	1
TCGTATG	1860	40.079613	45
GTCCGGT	2010	39.71919	1
CGTGCCG	7260	36.496483	69
TCCGTAT	2780	35.754604	37
GTTCCGT	2830	35.124435	35
ACTATCG	7730	34.72845	58
AGTTCCG	2915	34.580513	34
CCGTATC	2900	33.55098	38
TATCGGT	8110	33.1445	60
TCGTGCC	8065	32.98382	68
ACGGTAC	8250	32.793095	45
ATCGGTC	8410	32.003796	61
GCACCGT	2280	31.636904	1
CCTTACG	8665	31.343796	41
GCCCTCT	12425	31.140635	1
TACGGTA	8725	31.12814	44
CTATCGG	8735	30.732904	59