HCY5TAFX2_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HCY5TAFX2_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5975819
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	55153	0.9229362535913487	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	19322	0.323336433047922	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	10991	0.1839245800450114	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	10120	0.16934917205490996	No Hit
CTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGC	9382	0.15699940041691357	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	8037	0.1344920252772047	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	6711	0.11230259818779652	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6603	0.1104953145334556	No Hit
CTCATTTGGATGTGTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTC	6372	0.10662973560611524	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	6073	0.10162623734085653	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	1970	47.531403	15
CGTCTGA	2035	45.843044	16
ACACGTC	2100	45.174522	13
CACACGT	2290	42.311535	12
CACGTCT	2300	40.79343	14
CGATCGG	1765	40.571198	70
GCACACG	2505	38.955997	11
CCGATCG	3685	38.091244	70
TCGGAAG	2865	34.932407	3
ATCGGAA	2925	34.69388	2
CGGAAGA	2990	34.52167	4
CCCGATC	4115	34.358547	69
GATCGGA	2745	34.317986	1
TCGACGT	445	32.94088	45
ACCCGAT	4385	31.427313	68
TATCGCG	1015	29.869638	33
ATCGCGG	1025	29.579466	34
AGAGCAC	3495	29.113493	8
CGACGTA	525	28.590664	46
CCGTTCG	670	28.087551	34