HCWY5BGXF_n01_ChiP-zmm16.root-line12-input2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HCWY5BGXF_n01_ChiP-zmm16.root-line12-input2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8324119
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	1320	0.0	8.751594	44
AGTCACG	1260	0.0	8.332748	28
TCACGTA	1370	0.0	7.663741	30
GTCACGT	1250	5.456968E-12	7.5594687	29
CTCGTAT	1495	0.0	7.492508	42
ATGCCGT	1390	1.8189894E-12	7.3036194	47
CACGTAG	1455	0.0	7.216075	31
CGTAGAG	1575	0.0	7.1107817	33
TATGCCG	1590	0.0	7.0453925	46
ACGTAGA	1650	1.03682396E-10	6.1511564	32
AGATCGG	6490	0.0	5.986899	70
ACGTCTG	1805	1.6734703E-10	5.815647	15
TCGTATG	2085	7.2759576E-12	5.7082334	43
GTATGCC	2455	5.456968E-12	5.276005	45
ATCGGAA	5780	0.0	5.2082787	70
ACACGTC	2310	1.2732926E-10	5.152175	70
CGTCTGA	2350	2.0918378E-10	5.0625005	16
TCTCGTA	2370	2.6375346E-10	5.021619	41