HCWTMBGXF_n01_bulk_27.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HCWTMBGXF_n01_bulk_27.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23544415
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATTTATAAAATTTTTTTATAGATAGAAACCGATCTGGCTCACACCGA	36001	0.15290675092160924	No Hit
CTTTCGTACAAATTTATAAAATTTTTTTATAGATAGAAACCGATCTGGCT	32688	0.1388354732958963	No Hit
CGAGGTCATAATCCCAATTATATATATACTACAAAATTAAATTATGCTGT	31013	0.13172125958534114	No Hit
CTTCATTCTAGACTTCATTTAAAAGACTATTGATTATGCTACCTTTGTAC	28012	0.11897513699108683	No Hit
CTCCTTCATTCTAGACTTCATTTAAAAGACTATTGATTATGCTACCTTTG	27853	0.11829981760005505	No Hit
CTAGACTTCATTTAAAAGACTATTGATTATGCTACCTTTGTACAGTCAAT	26697	0.11338994831683012	No Hit
ATTTTATTCTTAAAATAAAAAATATTTTTCATAAACAATCCTTTCGTACA	25944	0.11019173761590594	No Hit
ATAGATATTAATTTTATTCTTAAAATAAAAAATATTTTTCATAAACAATC	25344	0.10764336255540856	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTCATA	29475	18.202658	4
GAGGTCA	31695	15.989776	2
AGGTCAT	31440	15.88889	3
TAATCCC	35210	15.319396	9
GTCATAA	40025	13.785196	5
TAGATAT	34845	11.839347	2
TCTAGAC	35715	11.591128	7
GAGCATG	12975	11.454538	145
ATAATCC	48650	11.444905	8
CGTACAA	49405	11.417429	5
GATATTA	39900	11.411523	4
GTCCCAT	32130	11.395027	9
CGAGGTC	45075	11.17967	1
ATTCTAG	39770	11.066052	5
TTCGTAC	48380	11.044817	3
CATAATC	49765	11.042959	7
AAGAGCC	12925	10.994021	145
CGTCCCA	32885	10.868833	8
CTAGACT	39250	10.36232	8
CATTCTA	44890	10.1591625	4